RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RAPGEF3O95398 923 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 GNG11P61952 73 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 TRAF1Q13077 416 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 FAM76AQ8TAV0 307 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 ANKRD7Q92527 254 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 BUB1BO60566 1050 aaPredicted RBP12.05□□□□□ -0.48
PRDM1-201ENST00000369089 GYS2P54840 703 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 RWDD2BP57060 319 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 SLC8A1P32418 973 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 MVPQ14764 893 aaKnown RBP12.05□□□□□ -0.48
PRDM1-201ENST00000369089 FRMD3A2A2Y4 597 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
PRDM1-201ENST00000369089 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
PRDM1-201ENST00000369089 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
PRDM1-201ENST00000369089 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ERC2O15083 957 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 A6NNZ2 444 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 SSBP05455 408 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRDM1-201ENST00000369089 CSB-PGBD3P0DP91 1061 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 TUBB8Q3ZCM7 444 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 KIAA1524Q8TCG1 905 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
PRDM1-201ENST00000369089 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
PRDM1-201ENST00000369089 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 DDX19AQ9NUU7 478 aaKnown RBP12.03□□□□□ -0.48
PRDM1-201ENST00000369089 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 KCNG1Q9UIX4 513 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
PRDM1-201ENST00000369089 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 TEX11Q8IYF3 940 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 CABP2Q9NPB3 220 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 ANO10Q9NW15 660 aa12.03□□□□□ -0.48
PRDM1-201ENST00000369089 CCDC69A6NI79 296 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.48
PRDM1-201ENST00000369089 NDUFAB1O14561 156 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 CHUKO15111 745 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 SPATA32Q96LK8 384 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 HYPKQ9NX55 129 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 NCOA1Q15788 1441 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.48
PRDM1-201ENST00000369089 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.48
PRDM1-201ENST00000369089 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.02□□□□□ -0.48
PRDM1-201ENST00000369089 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 ATRIPQ8WXE1 791 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 GGNBP2Q9H3C7 697 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
PRDM1-201ENST00000369089 OPA1O60313 960 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 RANBP1P43487 201 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 RNF217Q8TC41 542 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 ATP2C2O75185 946 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 ELF1P32519 619 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
PRDM1-201ENST00000369089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC175P0C221 793 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
PRDM1-201ENST00000369089 TXLNAP40222 546 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC38Q502W7 563 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 SH2D4BQ5SQS7 431 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 CLASRPQ8N2M8 674 aaKnown RBP12.01□□□□□ -0.49
PRDM1-201ENST00000369089 PYCARDQ9ULZ3 195 aa12.01□□□□□ -0.49
PRDM1-201ENST00000369089 CHCHD3Q9NX63 227 aaKnown RBP12□□□□□ -0.49
PRDM1-201ENST00000369089 CFAP45Q9UL16 551 aa12□□□□□ -0.49
PRDM1-201ENST00000369089 SNCBQ16143 134 aa12□□□□□ -0.49
PRDM1-201ENST00000369089 BMP2KLQ5H9B9 411 aa12□□□□□ -0.49
PRDM1-201ENST00000369089 IQCA1Q86XH1 822 aa12□□□□□ -0.49
PRDM1-201ENST00000369089 RUNDC1Q96C34 613 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 SPTLC3Q9NUV7 552 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
PRDM1-201ENST00000369089 TBC1D31Q96DN5 1066 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 SLC52A1Q9NWF4 448 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CTAGE15A4D2H0 777 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CTAGE8P0CG41 777 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 POLD1P28340 1107 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CTAGE6Q86UF2 777 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CTAGE4Q8IX94 777 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 RUFY2Q8WXA3 655 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
PRDM1-201ENST00000369089 PPP2R1AP30153 589 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 SEPT6Q14141 434 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CFAP100Q494V2 611 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 CARD6Q9BX69 1037 aa11.99□□□□□ -0.49
PRDM1-201ENST00000369089 SCAND2PQ9GZW5 306 aaPredicted RBP11.99□□□□□ -0.49
PRDM1-201ENST00000369089 MTHFSP49914 203 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms