RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 DDX21Q9NR30 783 aaKnown RBP eCLIP23.97■■□□□ 1.43
CHTOP-202ENST00000368687 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
CHTOP-202ENST00000368687 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
CHTOP-202ENST00000368687 GRIN3BO60391 1043 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 BICDL1Q6ZP65 573 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 WWC3Q9ULE0 1092 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 PDZRN3Q9UPQ7 1066 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 NUP98P52948 1817 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 KIAA1551Q9HCM1 1747 aa23.95■■□□□ 1.42
CHTOP-202ENST00000368687 PDIA6Q15084 440 aa23.94■■□□□ 1.42
CHTOP-202ENST00000368687 KRT24Q2M2I5 525 aa23.94■■□□□ 1.42
CHTOP-202ENST00000368687 ATP10DQ9P241 1426 aa23.93■■□□□ 1.42
CHTOP-202ENST00000368687 CHD4Q14839 1912 aa23.93■■□□□ 1.42
CHTOP-202ENST00000368687 NPHP1O15259 732 aa23.93■■□□□ 1.42
CHTOP-202ENST00000368687 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
CHTOP-202ENST00000368687 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
CHTOP-202ENST00000368687 CNBD1Q8NA66 436 aa23.92■■□□□ 1.42
CHTOP-202ENST00000368687 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
CHTOP-202ENST00000368687 HYPKQ9NX55 129 aa23.92■■□□□ 1.42
CHTOP-202ENST00000368687 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
CHTOP-202ENST00000368687 ST5P78524 1137 aa23.91■■□□□ 1.42
CHTOP-202ENST00000368687 MYH16Q9H6N6 1097 aa23.91■■□□□ 1.42
CHTOP-202ENST00000368687 CHPF2Q9P2E5 772 aa23.91■■□□□ 1.42
CHTOP-202ENST00000368687 NIP7Q9Y221 180 aaKnown RBP eCLIP23.91■■□□□ 1.42
CHTOP-202ENST00000368687 HSP90AB3PQ58FF7 597 aa23.9■■□□□ 1.42
CHTOP-202ENST00000368687 CCDC30Q5VVM6 783 aa23.9■■□□□ 1.42
CHTOP-202ENST00000368687 NBPF5PQ86XG9 351 aaPredicted RBP23.9■■□□□ 1.42
CHTOP-202ENST00000368687 NECTIN2Q92692 538 aa23.9■■□□□ 1.42
CHTOP-202ENST00000368687 SALL2Q9Y467 1007 aaPredicted RBP23.9■■□□□ 1.42
CHTOP-202ENST00000368687 DLEC1Q9Y238 1755 aa23.89■■□□□ 1.42
CHTOP-202ENST00000368687 TPTE2Q6XPS3 522 aa23.89■■□□□ 1.41
CHTOP-202ENST00000368687 GIGYF2Q6Y7W6 1299 aaKnown RBP23.89■■□□□ 1.41
CHTOP-202ENST00000368687 TTLL7Q6ZT98 887 aa23.89■■□□□ 1.41
CHTOP-202ENST00000368687 TSR2Q969E8 191 aaKnown RBP23.89■■□□□ 1.41
CHTOP-202ENST00000368687 BRIP1Q9BX63 1249 aa23.89■■□□□ 1.41
CHTOP-202ENST00000368687 NYXQ9GZU5 481 aa23.89■■□□□ 1.41
CHTOP-202ENST00000368687 IBTKQ9P2D0 1353 aaPredicted RBP23.89■■□□□ 1.41
CHTOP-202ENST00000368687 PDE6BP35913 854 aa23.88■■□□□ 1.41
CHTOP-202ENST00000368687 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
CHTOP-202ENST00000368687 PROSER3Q2NL68 480 aa23.88■■□□□ 1.41
CHTOP-202ENST00000368687 ZBTB3Q9H5J0 574 aa23.88■■□□□ 1.41
CHTOP-202ENST00000368687 CACNA1FO60840 1977 aa23.88■■□□□ 1.41
CHTOP-202ENST00000368687 FANCIQ9NVI1 1328 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 A0A0G2JLW4 131 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 DPEP1P16444 411 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 HLFQ16534 295 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 PRR5LQ6MZQ0 368 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 COPS6Q7L5N1 327 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 C8orf58Q8NAV2 365 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 PIM2Q9P1W9 311 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 ANKRD36CQ5JPF3 1778 aa23.87■■□□□ 1.41
CHTOP-202ENST00000368687 PARP10Q53GL7 1025 aa23.86■■□□□ 1.41
CHTOP-202ENST00000368687 XAGE3Q8WTP9 111 aa23.86■■□□□ 1.41
CHTOP-202ENST00000368687 ZNF521Q96K83 1311 aa23.85■■□□□ 1.41
CHTOP-202ENST00000368687 ARFGEF1Q9Y6D6 1849 aa23.85■■□□□ 1.41
CHTOP-202ENST00000368687 SENP3-EIF4A1A0A087X0R7 540 aa23.85■■□□□ 1.41
CHTOP-202ENST00000368687 ELL2O00472 640 aaPredicted RBP23.85■■□□□ 1.41
CHTOP-202ENST00000368687 TWISTNBQ3B726 338 aaPredicted RBP23.85■■□□□ 1.41
CHTOP-202ENST00000368687 STK31Q9BXU1 1019 aa23.85■■□□□ 1.41
CHTOP-202ENST00000368687 ANKRD31Q8N7Z5 1873 aa23.85■■□□□ 1.41
CHTOP-202ENST00000368687 H0YIN7 160 aa23.84■■□□□ 1.41
CHTOP-202ENST00000368687 ANXA1P04083 346 aa23.84■■□□□ 1.41
CHTOP-202ENST00000368687 PLBD2Q8NHP8 589 aa23.84■■□□□ 1.41
CHTOP-202ENST00000368687 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CHTOP-202ENST00000368687 AIMP1Q12904 312 aaKnown RBP23.83■■□□□ 1.41
CHTOP-202ENST00000368687 PPP1R42Q7Z4L9 355 aa23.83■■□□□ 1.41
CHTOP-202ENST00000368687 KCNA3P22001 575 aa23.82■■□□□ 1.4
CHTOP-202ENST00000368687 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
CHTOP-202ENST00000368687 DALRD3Q5D0E6 543 aaKnown RBP23.82■■□□□ 1.4
CHTOP-202ENST00000368687 ANKRD13DQ6ZTN6 518 aa23.82■■□□□ 1.4
CHTOP-202ENST00000368687 ZNF34Q8IZ26 560 aa23.82■■□□□ 1.4
CHTOP-202ENST00000368687 DDX58O95786 925 aaKnown RBP23.81■■□□□ 1.4
CHTOP-202ENST00000368687 C2CD5Q86YS7 1000 aa23.81■■□□□ 1.4
CHTOP-202ENST00000368687 MIER1Q8N108 512 aa23.81■■□□□ 1.4
CHTOP-202ENST00000368687 TSPYL6Q8N831 410 aa23.81■■□□□ 1.4
CHTOP-202ENST00000368687 BCS1LQ9Y276 419 aa23.81■■□□□ 1.4
CHTOP-202ENST00000368687 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
CHTOP-202ENST00000368687 E9PSI1 815 aa23.8■■□□□ 1.4
CHTOP-202ENST00000368687 ARFGEF2Q9Y6D5 1785 aa23.79■■□□□ 1.4
CHTOP-202ENST00000368687 CHRNA5P30532 468 aa23.79■■□□□ 1.4
CHTOP-202ENST00000368687 TCIRG1Q13488 830 aa23.79■■□□□ 1.4
CHTOP-202ENST00000368687 GPTP24298 496 aa23.78■■□□□ 1.4
CHTOP-202ENST00000368687 TTLL6Q8N841 843 aa23.78■■□□□ 1.4
CHTOP-202ENST00000368687 UBN2Q6ZU65 1347 aa23.78■■□□□ 1.4
CHTOP-202ENST00000368687 COL11A2P13942 1736 aaPredicted RBP23.77■■□□□ 1.4
CHTOP-202ENST00000368687 EXOSC9Q06265 439 aaKnown RBP23.76■■□□□ 1.39
CHTOP-202ENST00000368687 STYK1Q6J9G0 422 aa23.76■■□□□ 1.39
CHTOP-202ENST00000368687 CNKSR1Q969H4 720 aa23.76■■□□□ 1.39
CHTOP-202ENST00000368687 MASTLQ96GX5 879 aa23.76■■□□□ 1.39
CHTOP-202ENST00000368687 UTP14AQ9BVJ6 771 aaKnown RBP23.76■■□□□ 1.39
CHTOP-202ENST00000368687 KLRG2A4D1S0 409 aaPredicted RBP23.75■■□□□ 1.39
CHTOP-202ENST00000368687 FAM177BA6PVY3 158 aa23.75■■□□□ 1.39
CHTOP-202ENST00000368687 SRGNP10124 158 aa23.75■■□□□ 1.39
CHTOP-202ENST00000368687 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
CHTOP-202ENST00000368687 ADCY9O60503 1353 aa23.75■■□□□ 1.39
CHTOP-202ENST00000368687 VAMP4O75379 141 aa23.74■■□□□ 1.39
CHTOP-202ENST00000368687 NTSR2O95665 410 aa23.74■■□□□ 1.39
CHTOP-202ENST00000368687 SUSD4Q5VX71 490 aa23.74■■□□□ 1.39
CHTOP-202ENST00000368687 SPINK5Q9NQ38 1064 aaPredicted RBP23.74■■□□□ 1.39
CHTOP-202ENST00000368687 NPR1P16066 1061 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms