RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 MBIPQ9NS73 344 aa31.14■■■□□ 2.58
PFDN2-201ENST00000368010 GOLGB1Q14789 3259 aaKnown RBP31.13■■■□□ 2.57
PFDN2-201ENST00000368010 CNBD1Q8NA66 436 aa31.13■■■□□ 2.57
PFDN2-201ENST00000368010 MAP3K15Q6ZN16 1313 aa31.13■■■□□ 2.57
PFDN2-201ENST00000368010 ERVV-1B6SEH8 477 aa31.12■■■□□ 2.57
PFDN2-201ENST00000368010 HLFQ16534 295 aa31.12■■■□□ 2.57
PFDN2-201ENST00000368010 TTLL7Q6ZT98 887 aa31.12■■■□□ 2.57
PFDN2-201ENST00000368010 NIP7Q9Y221 180 aaKnown RBP eCLIP31.12■■■□□ 2.57
PFDN2-201ENST00000368010 HOXB7P09629 217 aa31.11■■■□□ 2.57
PFDN2-201ENST00000368010 BRCA1P38398 1863 aaKnown RBP31.11■■■□□ 2.57
PFDN2-201ENST00000368010 PDIA6Q15084 440 aa31.11■■■□□ 2.57
PFDN2-201ENST00000368010 CCDC27Q2M243 656 aa31.11■■■□□ 2.57
PFDN2-201ENST00000368010 NECTIN2Q92692 538 aa31.11■■■□□ 2.57
PFDN2-201ENST00000368010 DALRD3Q5D0E6 543 aaKnown RBP31.1■■■□□ 2.57
PFDN2-201ENST00000368010 SENP3-EIF4A1A0A087X0R7 540 aa31.09■■■□□ 2.57
PFDN2-201ENST00000368010 ST5P78524 1137 aa31.09■■■□□ 2.57
PFDN2-201ENST00000368010 NBPF5PQ86XG9 351 aaPredicted RBP31.09■■■□□ 2.57
PFDN2-201ENST00000368010 BRIP1Q9BX63 1249 aa31.09■■■□□ 2.57
PFDN2-201ENST00000368010 PROSER3Q2NL68 480 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 HDGFL1Q5TGJ6 251 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 LRP10Q7Z4F1 713 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 C2CD5Q86YS7 1000 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 CCDC24Q8N4L8 307 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 ZBTB3Q9H5J0 574 aa31.08■■■□□ 2.57
PFDN2-201ENST00000368010 H0YIN7 160 aa31.07■■■□□ 2.56
PFDN2-201ENST00000368010 ANXA1P04083 346 aa31.07■■■□□ 2.56
PFDN2-201ENST00000368010 PDE6BP35913 854 aa31.07■■■□□ 2.56
PFDN2-201ENST00000368010 NCBP3Q53F19 620 aaKnown RBP31.07■■■□□ 2.56
PFDN2-201ENST00000368010 DUSP27Q5VZP5 1158 aa31.07■■■□□ 2.56
PFDN2-201ENST00000368010 PDZRN3Q9UPQ7 1066 aa31.07■■■□□ 2.56
PFDN2-201ENST00000368010 WWC1Q8IX03 1113 aa31.06■■■□□ 2.56
PFDN2-201ENST00000368010 FAM9BQ8IZU0 186 aa31.06■■■□□ 2.56
PFDN2-201ENST00000368010 DDX21Q9NR30 783 aaKnown RBP eCLIP31.06■■■□□ 2.56
PFDN2-201ENST00000368010 ATP10DQ9P241 1426 aa31.06■■■□□ 2.56
PFDN2-201ENST00000368010 TPTE2Q6XPS3 522 aa31.04■■■□□ 2.56
PFDN2-201ENST00000368010 ZNF784Q8NCA9 323 aaPredicted RBP31.03■■■□□ 2.56
PFDN2-201ENST00000368010 CHPF2Q9P2E5 772 aa31.03■■■□□ 2.56
PFDN2-201ENST00000368010 ANKRD31Q8N7Z5 1873 aa31.03■■■□□ 2.56
PFDN2-201ENST00000368010 DLEC1Q9Y238 1755 aa31.02■■■□□ 2.56
PFDN2-201ENST00000368010 FAM177BA6PVY3 158 aa31.02■■■□□ 2.56
PFDN2-201ENST00000368010 GIGYF2Q6Y7W6 1299 aaKnown RBP31.02■■■□□ 2.56
PFDN2-201ENST00000368010 ARHGAP27Q6ZUM4 889 aa31.02■■■□□ 2.56
PFDN2-201ENST00000368010 DBF4Q9UBU7 674 aaPredicted RBP31.02■■■□□ 2.56
PFDN2-201ENST00000368010 ARFGEF1Q9Y6D6 1849 aa31.01■■■□□ 2.56
PFDN2-201ENST00000368010 COPS6Q7L5N1 327 aa31.01■■■□□ 2.55
PFDN2-201ENST00000368010 XAGE3Q8WTP9 111 aa31.01■■■□□ 2.55
PFDN2-201ENST00000368010 AIMP1Q12904 312 aaKnown RBP31■■■□□ 2.55
PFDN2-201ENST00000368010 TTLL6Q8N841 843 aa31■■■□□ 2.55
PFDN2-201ENST00000368010 NUP98P52948 1817 aa31■■■□□ 2.55
PFDN2-201ENST00000368010 GPTP24298 496 aa30.99■■■□□ 2.55
PFDN2-201ENST00000368010 GTF2E1P29083 439 aaPredicted RBP30.99■■■□□ 2.55
PFDN2-201ENST00000368010 NYXQ9GZU5 481 aa30.99■■■□□ 2.55
PFDN2-201ENST00000368010 IL16Q14005 1332 aa30.98■■■□□ 2.55
PFDN2-201ENST00000368010 ELL2O00472 640 aaPredicted RBP30.98■■■□□ 2.55
PFDN2-201ENST00000368010 ZNF622Q969S3 477 aaKnown RBP eCLIP30.98■■■□□ 2.552e-10■□□□□ 11
PFDN2-201ENST00000368010 SALL2Q9Y467 1007 aaPredicted RBP30.98■■■□□ 2.55
PFDN2-201ENST00000368010 ZNF34Q8IZ26 560 aa30.97■■■□□ 2.55
PFDN2-201ENST00000368010 UBN2Q6ZU65 1347 aa30.97■■■□□ 2.55
PFDN2-201ENST00000368010 COL11A2P13942 1736 aaPredicted RBP30.96■■■□□ 2.55
PFDN2-201ENST00000368010 IBTKQ9P2D0 1353 aaPredicted RBP30.96■■■□□ 2.55
PFDN2-201ENST00000368010 C8orf58Q8NAV2 365 aa30.96■■■□□ 2.55
PFDN2-201ENST00000368010 TSR2Q969E8 191 aaKnown RBP30.96■■■□□ 2.55
PFDN2-201ENST00000368010 HSP90AB3PQ58FF7 597 aa30.95■■■□□ 2.55
PFDN2-201ENST00000368010 HYPKQ9NX55 129 aa30.95■■■□□ 2.55
PFDN2-201ENST00000368010 SRGNP10124 158 aa30.94■■■□□ 2.54
PFDN2-201ENST00000368010 PARP10Q53GL7 1025 aa30.94■■■□□ 2.54
PFDN2-201ENST00000368010 CHMP4AQ9BY43 222 aa30.94■■■□□ 2.54
PFDN2-201ENST00000368010 ADCY9O60503 1353 aa30.93■■■□□ 2.54
PFDN2-201ENST00000368010 STYK1Q6J9G0 422 aa30.93■■■□□ 2.54
PFDN2-201ENST00000368010 WDR63Q8IWG1 891 aa30.93■■■□□ 2.54
PFDN2-201ENST00000368010 MASTLQ96GX5 879 aa30.93■■■□□ 2.54
PFDN2-201ENST00000368010 SUSD4Q5VX71 490 aa30.92■■■□□ 2.54
PFDN2-201ENST00000368010 NUTM1Q86Y26 1132 aa30.92■■■□□ 2.54
PFDN2-201ENST00000368010 PPP1R42Q7Z4L9 355 aa30.91■■■□□ 2.54
PFDN2-201ENST00000368010 CNKSR1Q969H4 720 aa30.91■■■□□ 2.54
PFDN2-201ENST00000368010 ABCC12Q96J65 1359 aa30.91■■■□□ 2.54
PFDN2-201ENST00000368010 KLRG2A4D1S0 409 aaPredicted RBP30.9■■■□□ 2.54
PFDN2-201ENST00000368010 PLBD2Q8NHP8 589 aa30.9■■■□□ 2.54
PFDN2-201ENST00000368010 NTSR2O95665 410 aa30.89■■■□□ 2.54
PFDN2-201ENST00000368010 ERFEQ4G0M1 354 aa30.89■■■□□ 2.54
PFDN2-201ENST00000368010 CCDC30Q5VVM6 783 aa30.89■■■□□ 2.54
PFDN2-201ENST00000368010 TSPYL6Q8N831 410 aa30.89■■■□□ 2.54
PFDN2-201ENST00000368010 NPR1P16066 1061 aa30.88■■■□□ 2.53
PFDN2-201ENST00000368010 ANKRD13DQ6ZTN6 518 aa30.88■■■□□ 2.53
PFDN2-201ENST00000368010 TCIRG1Q13488 830 aa30.87■■■□□ 2.53
PFDN2-201ENST00000368010 FANCIQ9NVI1 1328 aa30.87■■■□□ 2.53
PFDN2-201ENST00000368010 RIC1Q4ADV7 1423 aa30.87■■■□□ 2.53
PFDN2-201ENST00000368010 PRPF40BQ6NWY9 871 aaKnown RBP30.86■■■□□ 2.53
PFDN2-201ENST00000368010 UTP14AQ9BVJ6 771 aaKnown RBP30.86■■■□□ 2.53
PFDN2-201ENST00000368010 ANKRD36CQ5JPF3 1778 aa30.86■■■□□ 2.53
PFDN2-201ENST00000368010 TNRC6CQ9HCJ0 1690 aaKnown RBP30.85■■■□□ 2.53
PFDN2-201ENST00000368010 RNF123Q5XPI4 1314 aa30.85■■■□□ 2.53
PFDN2-201ENST00000368010 TWISTNBQ3B726 338 aaPredicted RBP30.85■■■□□ 2.53
PFDN2-201ENST00000368010 NLRP10Q86W26 655 aa30.85■■■□□ 2.53
PFDN2-201ENST00000368010 CCER2I3L3R5 266 aa30.84■■■□□ 2.53
PFDN2-201ENST00000368010 C21orf2O43822 256 aa30.84■■■□□ 2.53
PFDN2-201ENST00000368010 GOLGA2Q08379 1002 aa30.84■■■□□ 2.53
PFDN2-201ENST00000368010 C9orf131Q5VYM1 1079 aa30.84■■■□□ 2.53
PFDN2-201ENST00000368010 ZNF219Q9P2Y4 722 aaPredicted RBP30.84■■■□□ 2.53
PFDN2-201ENST00000368010 PHAXQ9H814 394 aaKnown RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms