RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 DEFB115Q30KQ5 88 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 GCC1Q96CN9 775 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 SLC52A2Q9HAB3 445 aa8.41□□□□□ -1.06
CDC42SE2-201ENST00000360515 ECM29Q5VYK3 1845 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 TAF1P21675 1872 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 SMIM5Q71RC9 77 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 LTV1Q96GA3 475 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 CRY2Q49AN0 593 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 C2CD5Q86YS7 1000 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 HACL1Q9UJ83 578 aa8.4□□□□□ -1.06
CDC42SE2-201ENST00000360515 NPC1L1Q9UHC9 1359 aa8.4□□□□□ -1.07
CDC42SE2-201ENST00000360515 CAPN15O75808 1086 aa8.4□□□□□ -1.07
CDC42SE2-201ENST00000360515 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE2-201ENST00000360515 MASTLQ96GX5 879 aa8.4□□□□□ -1.07
CDC42SE2-201ENST00000360515 SRP68Q9UHB9 627 aaKnown RBP8.4□□□□□ -1.07
CDC42SE2-201ENST00000360515 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-201ENST00000360515 DDX21Q9NR30 783 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDC42SE2-201ENST00000360515 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
CDC42SE2-201ENST00000360515 RTKN2Q8IZC4 609 aa8.39□□□□□ -1.07
CDC42SE2-201ENST00000360515 PRR5LQ6MZQ0 368 aa8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 HEG1Q9ULI3 1381 aa8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 HOXA10P31260 410 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 USPL1Q5W0Q7 1092 aa8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
CDC42SE2-201ENST00000360515 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 EPHX2P34913 555 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 CCDC93Q567U6 631 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 MCOLN1Q9GZU1 580 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 ZPR1O75312 459 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 CAMTA2O94983 1202 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 NPR1P16066 1061 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 IL13P35225 146 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 CABP4P57796 275 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 ERFEQ4G0M1 354 aa8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-201ENST00000360515 ZNF541Q9H0D2 1346 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 PKN2Q16513 984 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 GOLGB1Q14789 3259 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 POTEIP0CG38 1075 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 POTEJP0CG39 1038 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 FBLN1P23142 703 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 CST9Q5W186 159 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
CDC42SE2-201ENST00000360515 RNF123Q5XPI4 1314 aa8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 FAM155AB1AL88 458 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 RNMTO43148 476 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-201ENST00000360515 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
CDC42SE2-201ENST00000360515 SCNN1DP51172 638 aa8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 DLG5Q8TDM6 1919 aa8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 TBC1D9BQ66K14 1250 aa8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 DNAJC10Q8IXB1 793 aa8.33□□□□□ -1.08
CDC42SE2-201ENST00000360515 MTHFSP49914 203 aa8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 ZBTB1Q9Y2K1 713 aa8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
CDC42SE2-201ENST00000360515 CASP8AP2Q9UKL3 1982 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 SIN3AQ96ST3 1273 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 RBM42Q9BTD8 480 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 ARAP2Q8WZ64 1704 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 NOGQ13253 232 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 ADARB2Q9NS39 739 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 A0A1B0GUL6 1792 aa8.31□□□□□ -1.08
CDC42SE2-201ENST00000360515 C21orf2O43822 256 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 ST5P78524 1137 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 GPR101Q96P66 508 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 STARD3NLO95772 234 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 MMP14P50281 582 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 CAPN2P17655 700 aa8.3□□□□□ -1.08
CDC42SE2-201ENST00000360515 ERVV-1B6SEH8 477 aa8.29□□□□□ -1.08
CDC42SE2-201ENST00000360515 SLC10A5Q5PT55 438 aa8.29□□□□□ -1.08
CDC42SE2-201ENST00000360515 FKBP1BP68106 108 aa8.29□□□□□ -1.08
CDC42SE2-201ENST00000360515 ZNF496Q96IT1 587 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE2-201ENST00000360515 GPRC5DQ9NZD1 345 aa8.29□□□□□ -1.08
CDC42SE2-201ENST00000360515 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
CDC42SE2-201ENST00000360515 CNBD1Q8NA66 436 aa8.28□□□□□ -1.08
CDC42SE2-201ENST00000360515 ERBB4Q15303 1308 aa8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 HTATSF1O43719 755 aaKnown RBP8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 SLC10A3P09131 477 aa8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 SYNE4Q8N205 404 aa8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 DPF2Q92785 391 aa8.27□□□□□ -1.08
CDC42SE2-201ENST00000360515 CTU1Q7Z7A3 348 aaKnown RBP8.27□□□□□ -1.09
CDC42SE2-201ENST00000360515 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
CDC42SE2-201ENST00000360515 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
CDC42SE2-201ENST00000360515 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms