RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 KIAA1524Q8TCG1 905 aa13.05□□□□□ -0.32
RPE-202ENST00000359429 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 SBNO1A3KN83 1393 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
RPE-202ENST00000359429 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
RPE-202ENST00000359429 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
RPE-202ENST00000359429 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
RPE-202ENST00000359429 CBX1P83916 185 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 ME3Q16798 604 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
RPE-202ENST00000359429 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
RPE-202ENST00000359429 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
RPE-202ENST00000359429 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.32
RPE-202ENST00000359429 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.32
RPE-202ENST00000359429 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.32
RPE-202ENST00000359429 ZHX1Q9UKY1 873 aaPredicted RBP13.02□□□□□ -0.32
RPE-202ENST00000359429 ATP6V1DQ9Y5K8 247 aa13.02□□□□□ -0.32
RPE-202ENST00000359429 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
RPE-202ENST00000359429 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
RPE-202ENST00000359429 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
RPE-202ENST00000359429 PDRG1Q9NUG6 133 aa13.02□□□□□ -0.33
RPE-202ENST00000359429 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
RPE-202ENST00000359429 ANXA1P04083 346 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 LIG1P18858 919 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 CAMK4Q16566 473 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 FERMT3Q86UX7 667 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 ADAMTS13Q76LX8 1427 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
RPE-202ENST00000359429 BEND3Q5T5X7 828 aa13□□□□□ -0.33
RPE-202ENST00000359429 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
RPE-202ENST00000359429 TPCN1Q9ULQ1 816 aa13□□□□□ -0.33
RPE-202ENST00000359429 AGLP35573 1532 aa13□□□□□ -0.33
RPE-202ENST00000359429 MAP3K5Q99683 1374 aa13□□□□□ -0.33
RPE-202ENST00000359429 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
RPE-202ENST00000359429 LUZP1Q86V48 1076 aa13□□□□□ -0.33
RPE-202ENST00000359429 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
RPE-202ENST00000359429 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
RPE-202ENST00000359429 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
RPE-202ENST00000359429 LRRC37A3O60309 1634 aa13□□□□□ -0.33
RPE-202ENST00000359429 PTGS1P23219 599 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 DMTNQ08495 405 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 USHBP1Q8N6Y0 703 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
RPE-202ENST00000359429 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
RPE-202ENST00000359429 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 LTKP29376 864 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
RPE-202ENST00000359429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.99□□□□□ -0.33
RPE-202ENST00000359429 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 KCNQ3O43525 872 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 KCNB2Q92953 911 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 HOXC9P31274 260 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 LRMPQ12912 555 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
RPE-202ENST00000359429 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
RPE-202ENST00000359429 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
RPE-202ENST00000359429 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
RPE-202ENST00000359429 FAM227BQ96M60 508 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 SH2B1Q9NRF2 756 aaPredicted RBP12.97□□□□□ -0.33
RPE-202ENST00000359429 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 NLRP6P59044 892 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 TYRO3Q06418 890 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
RPE-202ENST00000359429 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
RPE-202ENST00000359429 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.336e-8■■■□□ 15
RPE-202ENST00000359429 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
RPE-202ENST00000359429 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 CREB3L3Q68CJ9 461 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 PDCL2Q8N4E4 241 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 ANKRD7Q92527 254 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms