RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 CLEC17AQ6ZS10 378 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP6-202ENST00000357482 TFCP2L1Q9NZI6 479 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 MTFR1LQ9H019 292 aa17.88■□□□□ 0.45
USP6-202ENST00000357482 LY75O60449 1722 aa17.87■□□□□ 0.45
USP6-202ENST00000357482 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 PALLDQ8WX93 1383 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 PHKG2P15735 406 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 RAB3GAP1Q15042 981 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
USP6-202ENST00000357482 NKX1-1Q15270 411 aaPredicted RBP17.85■□□□□ 0.45
USP6-202ENST00000357482 CTR9Q6PD62 1173 aa17.85■□□□□ 0.45
USP6-202ENST00000357482 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
USP6-202ENST00000357482 TMOD3Q9NYL9 352 aa17.85■□□□□ 0.45
USP6-202ENST00000357482 E9PSI1 815 aa17.84■□□□□ 0.45
USP6-202ENST00000357482 PLEKHO1Q53GL0 409 aaPredicted RBP17.84■□□□□ 0.45
USP6-202ENST00000357482 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
USP6-202ENST00000357482 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
USP6-202ENST00000357482 SNX21Q969T3 373 aa17.84■□□□□ 0.45
USP6-202ENST00000357482 MTHFSP49914 203 aa17.84■□□□□ 0.45
USP6-202ENST00000357482 MFAP1P55081 439 aaKnown RBP17.84■□□□□ 0.45
USP6-202ENST00000357482 PIGBQ92521 554 aa17.84■□□□□ 0.45
USP6-202ENST00000357482 ITGB4P16144 1822 aa17.83■□□□□ 0.45
USP6-202ENST00000357482 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
USP6-202ENST00000357482 PTGER2P43116 358 aa17.83■□□□□ 0.44
USP6-202ENST00000357482 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
USP6-202ENST00000357482 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
USP6-202ENST00000357482 ANKRD7Q92527 254 aa17.83■□□□□ 0.44
USP6-202ENST00000357482 SYCP1Q15431 976 aa17.82■□□□□ 0.44
USP6-202ENST00000357482 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
USP6-202ENST00000357482 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
USP6-202ENST00000357482 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
USP6-202ENST00000357482 CEP120Q8N960 986 aa17.82■□□□□ 0.44
USP6-202ENST00000357482 HMGB2P26583 209 aaKnown RBP17.81■□□□□ 0.44
USP6-202ENST00000357482 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
USP6-202ENST00000357482 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
USP6-202ENST00000357482 PLEKHG2Q9H7P9 1386 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 SLFN14P0C7P3 912 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 IL13P35225 146 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 C5P01031 1676 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 CNPY4Q8N129 248 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
USP6-202ENST00000357482 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
USP6-202ENST00000357482 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP6-202ENST00000357482 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
USP6-202ENST00000357482 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
USP6-202ENST00000357482 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 POLD1P28340 1107 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 TRIM34Q9BYJ4 488 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 TUBGCP6Q96RT7 1819 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 AK7Q96M32 723 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
USP6-202ENST00000357482 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
USP6-202ENST00000357482 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
USP6-202ENST00000357482 HMOX1P09601 288 aa17.77■□□□□ 0.44
USP6-202ENST00000357482 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
USP6-202ENST00000357482 PIBF1Q8WXW3 757 aa17.77■□□□□ 0.44
USP6-202ENST00000357482 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 SPDYE4A6NLX3 237 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 SIK1P57059 783 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 CABP4P57796 275 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 SGIP1Q9BQI5 828 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 PHF14O94880 888 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
USP6-202ENST00000357482 DDX49Q9Y6V7 483 aaKnown RBP17.76■□□□□ 0.43
USP6-202ENST00000357482 KDRP35968 1356 aa17.76■□□□□ 0.43
USP6-202ENST00000357482 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
USP6-202ENST00000357482 CAPN2P17655 700 aa17.75■□□□□ 0.43
USP6-202ENST00000357482 TERF2Q15554 542 aa17.75■□□□□ 0.43
USP6-202ENST00000357482 ATP6V1AP38606 617 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
USP6-202ENST00000357482 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 SYT17Q9BSW7 474 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 KCNG1Q9UIX4 513 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 TAF1LQ8IZX4 1826 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 FLAD1Q8NFF5 587 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
USP6-202ENST00000357482 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
USP6-202ENST00000357482 C4BP0C0L5 1744 aa17.74■□□□□ 0.43
USP6-202ENST00000357482 KDM6AO15550 1401 aaPredicted RBP17.73■□□□□ 0.43
USP6-202ENST00000357482 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
USP6-202ENST00000357482 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
USP6-202ENST00000357482 TNNT3P45378 269 aaPredicted RBP17.72■□□□□ 0.43
USP6-202ENST00000357482 SPTLC3Q9NUV7 552 aa17.72■□□□□ 0.43
USP6-202ENST00000357482 CTIFO43310 598 aaKnown RBP17.72■□□□□ 0.43
USP6-202ENST00000357482 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
USP6-202ENST00000357482 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
USP6-202ENST00000357482 MYCBPQ99417 103 aaPredicted RBP17.72■□□□□ 0.43
USP6-202ENST00000357482 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
USP6-202ENST00000357482 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.43
USP6-202ENST00000357482 NOLC1Q14978 699 aaKnown RBP eCLIP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms