RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
GPM6B-202ENST00000355135 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
GPM6B-202ENST00000355135 FMNL2Q96PY5 1086 aa17.53■□□□□ 0.4
GPM6B-202ENST00000355135 API5Q9BZZ5 524 aaKnown RBP17.52■□□□□ 0.4
GPM6B-202ENST00000355135 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.4
GPM6B-202ENST00000355135 SKAP1Q86WV1 359 aa17.52■□□□□ 0.39
GPM6B-202ENST00000355135 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.39
GPM6B-202ENST00000355135 TEX13AQ9BXU3 409 aaPredicted RBP17.52■□□□□ 0.39
GPM6B-202ENST00000355135 FHDC1Q9C0D6 1143 aaPredicted RBP17.52■□□□□ 0.39
GPM6B-202ENST00000355135 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
GPM6B-202ENST00000355135 KCNQ3O43525 872 aa17.51■□□□□ 0.39
GPM6B-202ENST00000355135 STARD3NLO95772 234 aa17.5■□□□□ 0.39
GPM6B-202ENST00000355135 RFC4P35249 363 aa17.5■□□□□ 0.39
GPM6B-202ENST00000355135 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
GPM6B-202ENST00000355135 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
GPM6B-202ENST00000355135 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
GPM6B-202ENST00000355135 PTPRCP08575 1304 aa17.48■□□□□ 0.39
GPM6B-202ENST00000355135 RWDD1Q9H446 243 aaPredicted RBP17.48■□□□□ 0.39
GPM6B-202ENST00000355135 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
GPM6B-202ENST00000355135 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
GPM6B-202ENST00000355135 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
GPM6B-202ENST00000355135 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
GPM6B-202ENST00000355135 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
GPM6B-202ENST00000355135 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
GPM6B-202ENST00000355135 GYS1P13807 737 aa17.45■□□□□ 0.38
GPM6B-202ENST00000355135 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
GPM6B-202ENST00000355135 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
GPM6B-202ENST00000355135 COL15A1P39059 1388 aa17.45■□□□□ 0.38
GPM6B-202ENST00000355135 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
GPM6B-202ENST00000355135 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
GPM6B-202ENST00000355135 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
GPM6B-202ENST00000355135 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
GPM6B-202ENST00000355135 SRP68Q9UHB9 627 aaKnown RBP17.44■□□□□ 0.38
GPM6B-202ENST00000355135 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
GPM6B-202ENST00000355135 ZPR1O75312 459 aa17.43■□□□□ 0.38
GPM6B-202ENST00000355135 MMP10P09238 476 aa17.43■□□□□ 0.38
GPM6B-202ENST00000355135 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
GPM6B-202ENST00000355135 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
GPM6B-202ENST00000355135 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
GPM6B-202ENST00000355135 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
GPM6B-202ENST00000355135 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 A0A087WZG4 1122 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 A1BGP04217 495 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 HOXB7P09629 217 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
GPM6B-202ENST00000355135 RGS3P49796 1198 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 G2E3Q7L622 706 aa17.42■□□□□ 0.38
GPM6B-202ENST00000355135 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
GPM6B-202ENST00000355135 PDE4AP27815 886 aa17.4■□□□□ 0.38
GPM6B-202ENST00000355135 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
GPM6B-202ENST00000355135 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
GPM6B-202ENST00000355135 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
GPM6B-202ENST00000355135 NLGN2Q8NFZ4 835 aa17.39■□□□□ 0.37
GPM6B-202ENST00000355135 PARP3Q9Y6F1 533 aa17.39■□□□□ 0.37
GPM6B-202ENST00000355135 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
GPM6B-202ENST00000355135 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
GPM6B-202ENST00000355135 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
GPM6B-202ENST00000355135 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
GPM6B-202ENST00000355135 KIF13BQ9NQT8 1826 aa17.38■□□□□ 0.37
GPM6B-202ENST00000355135 FLIIQ13045 1269 aa17.38■□□□□ 0.37
GPM6B-202ENST00000355135 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
GPM6B-202ENST00000355135 SCN7AQ01118 1682 aa17.37■□□□□ 0.37
GPM6B-202ENST00000355135 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
GPM6B-202ENST00000355135 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
GPM6B-202ENST00000355135 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
GPM6B-202ENST00000355135 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
GPM6B-202ENST00000355135 TM4SF1P30408 202 aa17.36■□□□□ 0.37
GPM6B-202ENST00000355135 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
GPM6B-202ENST00000355135 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 F6X3S4 739 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
GPM6B-202ENST00000355135 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
GPM6B-202ENST00000355135 DDR1Q08345 913 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
GPM6B-202ENST00000355135 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
GPM6B-202ENST00000355135 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 C10orf71Q711Q0 1435 aa17.35■□□□□ 0.37
GPM6B-202ENST00000355135 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
GPM6B-202ENST00000355135 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
GPM6B-202ENST00000355135 NFIXQ14938 502 aa17.34■□□□□ 0.37
GPM6B-202ENST00000355135 ATP10DQ9P241 1426 aa17.33■□□□□ 0.37
GPM6B-202ENST00000355135 EIF2S2P20042 333 aaKnown RBP17.33■□□□□ 0.37
GPM6B-202ENST00000355135 GPR162Q16538 588 aa17.33■□□□□ 0.37
GPM6B-202ENST00000355135 FAM161AQ3B820 660 aa17.33■□□□□ 0.37
GPM6B-202ENST00000355135 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.37
GPM6B-202ENST00000355135 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
GPM6B-202ENST00000355135 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 SIRT2Q8IXJ6 389 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 TGFB2P61812 414 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 MEIS3Q99687 375 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
GPM6B-202ENST00000355135 KIAA1551Q9HCM1 1747 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms