RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 CTTNBP2Q8WZ74 1663 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 PTGS1P23219 599 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 LUZP1Q86V48 1076 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 LRRC59Q96AG4 307 aaKnown RBP12.25□□□□□ -0.45
SMG7-201ENST00000347615 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
SMG7-201ENST00000347615 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
SMG7-201ENST00000347615 KRT32Q14532 448 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 CDK5RAP3Q96JB5 506 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 DEF6Q9H4E7 631 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.452e-8■■■■■ 40.5
SMG7-201ENST00000347615 ZFYVE27Q5T4F4 411 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
SMG7-201ENST00000347615 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
SMG7-201ENST00000347615 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
SMG7-201ENST00000347615 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
SMG7-201ENST00000347615 FANCAO15360 1455 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 TSPYL1Q9H0U9 437 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
SMG7-201ENST00000347615 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
SMG7-201ENST00000347615 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 KIF18AQ8NI77 898 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 ACBD3Q9H3P7 528 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 ZKSCAN5Q9Y2L8 839 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 RXRAP19793 462 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 NMIQ13287 307 aaPredicted RBP12.23□□□□□ -0.45
SMG7-201ENST00000347615 PRM3Q9NNZ6 103 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
SMG7-201ENST00000347615 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 A2MP01023 1474 aa12.23□□□□□ -0.45
SMG7-201ENST00000347615 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 POLR3AO14802 1390 aaPredicted RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 F13A1P00488 732 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 TCOF1Q13428 1488 aaKnown RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 KRT18P05783 430 aaKnown RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 ARHGAP29Q52LW3 1261 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 Q6ZUG5 572 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 LIG1P18858 919 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 NOM1Q5C9Z4 860 aaKnown RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 IL16Q14005 1332 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 CASQ1P31415 396 aa12.22□□□□□ -0.45
SMG7-201ENST00000347615 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
SMG7-201ENST00000347615 KDM5BQ9UGL1 1544 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 CCP110O43303 1012 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 TXLNAP40222 546 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.45
SMG7-201ENST00000347615 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 CBFA2T2O43439 604 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.45
SMG7-201ENST00000347615 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
SMG7-201ENST00000347615 CNNM3Q8NE01 707 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.45
SMG7-201ENST00000347615 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
SMG7-201ENST00000347615 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 USP5P45974 858 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 CCDC181Q5TID7 509 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 AOPEPQ8N6M6 819 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
SMG7-201ENST00000347615 ZNF213O14771 459 aa12.21□□□□□ -0.46
SMG7-201ENST00000347615 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.46
SMG7-201ENST00000347615 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.46
SMG7-201ENST00000347615 MAGI3Q5TCQ9 1506 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 CHMLP26374 656 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 EIF5P55010 431 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 CCDC43Q96MW1 224 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 DYNC1I1O14576 645 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
SMG7-201ENST00000347615 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
SMG7-201ENST00000347615 SKILP12757 684 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
SMG7-201ENST00000347615 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
SMG7-201ENST00000347615 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms