RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
NLRC4-201ENST00000342905 TEX13AQ9BXU3 409 aaPredicted RBP11.16□□□□□ -0.62
NLRC4-201ENST00000342905 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
NLRC4-201ENST00000342905 STARD3NLO95772 234 aa11.15□□□□□ -0.63
NLRC4-201ENST00000342905 CYP19A1P11511 503 aaPredicted RBP11.15□□□□□ -0.63
NLRC4-201ENST00000342905 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.63
NLRC4-201ENST00000342905 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.63
NLRC4-201ENST00000342905 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.63
NLRC4-201ENST00000342905 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.63
NLRC4-201ENST00000342905 KCNQ3O43525 872 aa11.14□□□□□ -0.63
NLRC4-201ENST00000342905 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
NLRC4-201ENST00000342905 INTS5Q6P9B9 1019 aaKnown RBP11.14□□□□□ -0.63
NLRC4-201ENST00000342905 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
NLRC4-201ENST00000342905 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
NLRC4-201ENST00000342905 ARXQ96QS3 562 aa11.14□□□□□ -0.63
NLRC4-201ENST00000342905 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
NLRC4-201ENST00000342905 MYH14Q7Z406 1995 aaKnown RBP11.13□□□□□ -0.63
NLRC4-201ENST00000342905 RFC4P35249 363 aa11.13□□□□□ -0.63
NLRC4-201ENST00000342905 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
NLRC4-201ENST00000342905 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
NLRC4-201ENST00000342905 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
NLRC4-201ENST00000342905 SNRPA1P09661 255 aaKnown RBP11.12□□□□□ -0.63
NLRC4-201ENST00000342905 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
NLRC4-201ENST00000342905 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
NLRC4-201ENST00000342905 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
NLRC4-201ENST00000342905 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
NLRC4-201ENST00000342905 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
NLRC4-201ENST00000342905 ANKRD36CQ5JPF3 1778 aa11.12□□□□□ -0.63
NLRC4-201ENST00000342905 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
NLRC4-201ENST00000342905 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
NLRC4-201ENST00000342905 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
NLRC4-201ENST00000342905 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
NLRC4-201ENST00000342905 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
NLRC4-201ENST00000342905 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
NLRC4-201ENST00000342905 NUP98P52948 1817 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 COL15A1P39059 1388 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
NLRC4-201ENST00000342905 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 CRBNQ96SW2 442 aa11.1□□□□□ -0.63
NLRC4-201ENST00000342905 FHDC1Q9C0D6 1143 aaPredicted RBP11.1□□□□□ -0.63
NLRC4-201ENST00000342905 ZKSCAN2Q63HK3 967 aa11.09□□□□□ -0.63
NLRC4-201ENST00000342905 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
NLRC4-201ENST00000342905 NOB1Q9ULX3 412 aaKnown RBP11.09□□□□□ -0.63
NLRC4-201ENST00000342905 A0A087WZG4 1122 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 ZPR1O75312 459 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 HOXB7P09629 217 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 GYS1P13807 737 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
NLRC4-201ENST00000342905 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
NLRC4-201ENST00000342905 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 PANK1Q8TE04 598 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 SYT17Q9BSW7 474 aa11.08□□□□□ -0.64
NLRC4-201ENST00000342905 PRAMEF22A3QJZ6 481 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
NLRC4-201ENST00000342905 MMP10P09238 476 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 RLBP1P12271 317 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 TRIM27P14373 513 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
NLRC4-201ENST00000342905 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 USP16Q9Y5T5 823 aa11.07□□□□□ -0.64
NLRC4-201ENST00000342905 A1BGP04217 495 aa11.06□□□□□ -0.64
NLRC4-201ENST00000342905 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
NLRC4-201ENST00000342905 CLUAP1Q96AJ1 413 aa11.06□□□□□ -0.64
NLRC4-201ENST00000342905 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
NLRC4-201ENST00000342905 CD2APQ9Y5K6 639 aa11.06□□□□□ -0.64
NLRC4-201ENST00000342905 BCORQ6W2J9 1755 aa11.06□□□□□ -0.64
NLRC4-201ENST00000342905 IPO8O15397 1037 aaKnown RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 G2E3Q7L622 706 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 DZIP1LQ8IYY4 767 aaKnown RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 MYH3P11055 1940 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
NLRC4-201ENST00000342905 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
NLRC4-201ENST00000342905 MS4A1P11836 297 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 COG6Q9Y2V7 657 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 ABCC4O15439 1325 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 PTPRCP08575 1304 aa11.04□□□□□ -0.64
NLRC4-201ENST00000342905 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
NLRC4-201ENST00000342905 RGL2O15211 777 aa11.03□□□□□ -0.64
NLRC4-201ENST00000342905 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
NLRC4-201ENST00000342905 FTSJ3Q8IY81 847 aaKnown RBP11.03□□□□□ -0.64
NLRC4-201ENST00000342905 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms