RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 STIM2Q9P246 746 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 N4BP3O15049 544 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 NLRP5P59047 1200 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 CUL5Q93034 780 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 CALML4Q96GE6 196 aa12.04□□□□□ -0.48
CACNA1C-202ENST00000335762 CAPN2P17655 700 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 STXBP4Q6ZWJ1 553 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 OTUD6BQ8N6M0 293 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 TFIP11Q9UBB9 837 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 NDC80O14777 642 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 PUF60Q9UHX1 559 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 KIF5BP33176 963 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 RPUSD2Q8IZ73 545 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 CFAP58Q5T655 872 aa12.03□□□□□ -0.48
CACNA1C-202ENST00000335762 DZIP1Q86YF9 867 aaKnown RBP12.02□□□□□ -0.48
CACNA1C-202ENST00000335762 SPG7Q9UQ90 795 aa12.02□□□□□ -0.48
CACNA1C-202ENST00000335762 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.48
CACNA1C-202ENST00000335762 UBA7P41226 1012 aa12.02□□□□□ -0.48
CACNA1C-202ENST00000335762 PANK2Q9BZ23 570 aa12.02□□□□□ -0.48
CACNA1C-202ENST00000335762 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 RANBP6O60518 1105 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 KANK3Q6NY19 840 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 PYM1Q9BRP8 204 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 TTC16Q8NEE8 873 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 CYLC1P35663 651 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 BOLA2Q9H3K6 86 aa12.02□□□□□ -0.49
CACNA1C-202ENST00000335762 KIF3CO14782 793 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 ZFYP08048 801 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 RASAL2Q9UJF2 1139 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 A0A087WZG4 1122 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 TMEM87AQ8NBN3 555 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 PPFIBP2Q8ND30 876 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 SELENOOQ9BVL4 669 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 MIPOL1Q8TD10 442 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC114Q96M63 670 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 ZNF213O14771 459 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 TTC31Q49AM3 519 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 SYCP3Q8IZU3 236 aa12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-202ENST00000335762 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
CACNA1C-202ENST00000335762 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC110Q8TBZ0 833 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 LRRC45Q96CN5 670 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 RSRC1Q96IZ7 334 aaKnown RBP12□□□□□ -0.49
CACNA1C-202ENST00000335762 TRIM47Q96LD4 638 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 EHMT1Q9H9B1 1298 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 STX6O43752 255 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC174Q6PII3 467 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 ARFGAP2Q8N6H7 521 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 MKRN1Q9UHC7 482 aaKnown RBP12□□□□□ -0.49
CACNA1C-202ENST00000335762 CPLX4Q7Z7G2 160 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC63Q8NA47 563 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1C-202ENST00000335762 SKILP12757 684 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 ISM2Q6H9L7 571 aa12□□□□□ -0.49
CACNA1C-202ENST00000335762 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 MAP3K12Q12852 859 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 GBP6Q6ZN66 633 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 RFC1P35251 1148 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 LRRC27Q9C0I9 530 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 CPSF2Q9P2I0 782 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 UBASH3AP57075 661 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 SELENOSQ9BQE4 189 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 PRPHP41219 470 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 GRM1Q13255 1194 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 NOLC1Q14978 699 aaKnown RBP eCLIP11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 CATIPQ7Z7H3 387 aa11.99□□□□□ -0.49
CACNA1C-202ENST00000335762 TBC1D2Q9BYX2 928 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms