RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 F13A1P00488 732 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ADGBQ8N7X0 1667 aa11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
CSGALNACT1-201ENST00000332246 SLC4A8Q2Y0W8 1093 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 XAGE3Q8WTP9 111 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ZSCAN31Q96LW9 406 aaPredicted RBP11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 MAP7D2Q96T17 732 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ZSWIM4Q9H7M6 989 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 KDM5DQ9BY66 1539 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ATF3P18847 181 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 RXRAP19793 462 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 KLHL10Q6JEL2 608 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 THEMISQ8N1K5 641 aaPredicted RBP11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CEP126Q9P2H0 1117 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 FSIP1Q8NA03 581 aa11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 VPS37DQ86XT2 251 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CPLX3Q8WVH0 158 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CHD1O14646 1710 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NPATQ14207 1427 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CLSTN1O94985 981 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CCDC57Q2TAC2 916 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
CSGALNACT1-201ENST00000332246 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TPM3P06753 285 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 IFIT1P09914 478 aaKnown RBP11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 TIMM10P62072 90 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CFAP100Q494V2 611 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NCOA5Q9HCD5 579 aaKnown RBP11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 HIP1O00291 1037 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PTH1RQ03431 593 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 IQSEC3Q9UPP2 1182 aaPredicted RBP11.54□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 MARCKSP29966 332 aaPredicted RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 Q6ZUG5 572 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CDC42BPAQ5VT25 1732 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 MAST1Q9Y2H9 1570 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 JAK2O60674 1132 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PTPN14Q15678 1187 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CCDC158Q5M9N0 1113 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 IL17REQ8NFR9 667 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ABCC1P33527 1531 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ABCC4O15439 1325 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 POLR3GO15318 223 aaPredicted RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 APOBRQ0VD83 1088 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 ZNF396Q96N95 335 aaPredicted RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 SCAND2PQ9GZW5 306 aaPredicted RBP11.53□□□□□ -0.56
CSGALNACT1-201ENST00000332246 SOS1Q07889 1333 aaPredicted RBP11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 VPS53Q5VIR6 699 aa11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 OLFM4Q6UX06 510 aa11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 BICC1Q9H694 974 aaKnown RBP11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 PRDM11Q9NQV5 511 aa11.52□□□□□ -0.56
CSGALNACT1-201ENST00000332246 KCNA6P17658 529 aa11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LRMPQ12912 555 aa11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TYRO3Q06418 890 aa11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.57
CSGALNACT1-201ENST00000332246 GRM8O00222 908 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 CDC37L1Q7L3B6 337 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 TMC6Q7Z403 805 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 KIF2CQ99661 725 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 MARCH6O60337 910 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 C8orf76Q96K31 380 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 PIK3R4Q99570 1358 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ERICH2A1L162 156 aa11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
CSGALNACT1-201ENST00000332246 SYNMO15061 1565 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
CSGALNACT1-201ENST00000332246 ZNF445P59923 1031 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms