RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
TUBA3D-201ENST00000321253 NECTIN2Q92692 538 aa19.04■□□□□ 0.64
TUBA3D-201ENST00000321253 KIAA1551Q9HCM1 1747 aa19.03■□□□□ 0.64
TUBA3D-201ENST00000321253 ERVV-1B6SEH8 477 aa19.02■□□□□ 0.64
TUBA3D-201ENST00000321253 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
TUBA3D-201ENST00000321253 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
TUBA3D-201ENST00000321253 MAP3K15Q6ZN16 1313 aa19.02■□□□□ 0.64
TUBA3D-201ENST00000321253 PDIA6Q15084 440 aa19.01■□□□□ 0.63
TUBA3D-201ENST00000321253 TTLL7Q6ZT98 887 aa19.01■□□□□ 0.63
TUBA3D-201ENST00000321253 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
TUBA3D-201ENST00000321253 NIP7Q9Y221 180 aaKnown RBP eCLIP19.01■□□□□ 0.63
TUBA3D-201ENST00000321253 SALL2Q9Y467 1007 aaPredicted RBP19.01■□□□□ 0.63
TUBA3D-201ENST00000321253 HLFQ16534 295 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 NBPF5PQ86XG9 351 aaPredicted RBP19■□□□□ 0.63
TUBA3D-201ENST00000321253 ZBTB3Q9H5J0 574 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 PIM2Q9P1W9 311 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 BCS1LQ9Y276 419 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 CHD4Q14839 1912 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 ANXA1P04083 346 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 CHRNA5P30532 468 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 ST5P78524 1137 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 PROSER3Q2NL68 480 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 PRR5LQ6MZQ0 368 aa19■□□□□ 0.63
TUBA3D-201ENST00000321253 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
TUBA3D-201ENST00000321253 CHPF2Q9P2E5 772 aa18.99■□□□□ 0.63
TUBA3D-201ENST00000321253 IL16Q14005 1332 aa18.99■□□□□ 0.63
TUBA3D-201ENST00000321253 KCNA3P22001 575 aa18.98■□□□□ 0.63
TUBA3D-201ENST00000321253 LRP10Q7Z4F1 713 aa18.98■□□□□ 0.63
TUBA3D-201ENST00000321253 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
TUBA3D-201ENST00000321253 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
TUBA3D-201ENST00000321253 H0YIN7 160 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 ELL2O00472 640 aaPredicted RBP18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 PDE6BP35913 854 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 DALRD3Q5D0E6 543 aaKnown RBP18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 CCDC24Q8N4L8 307 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 BRCA1P38398 1863 aaKnown RBP18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 NUP98P52948 1817 aa18.97■□□□□ 0.63
TUBA3D-201ENST00000321253 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 FAM177BA6PVY3 158 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 COPS6Q7L5N1 327 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 WDR63Q8IWG1 891 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 XAGE3Q8WTP9 111 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 TSR2Q969E8 191 aaKnown RBP18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
TUBA3D-201ENST00000321253 GTF2E1P29083 439 aaPredicted RBP18.95■□□□□ 0.62
TUBA3D-201ENST00000321253 GIGYF2Q6Y7W6 1299 aaKnown RBP18.95■□□□□ 0.62
TUBA3D-201ENST00000321253 C8orf58Q8NAV2 365 aa18.95■□□□□ 0.62
TUBA3D-201ENST00000321253 GPTP24298 496 aa18.95■□□□□ 0.62
TUBA3D-201ENST00000321253 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
TUBA3D-201ENST00000321253 ANKRD31Q8N7Z5 1873 aa18.94■□□□□ 0.62
TUBA3D-201ENST00000321253 NYXQ9GZU5 481 aa18.94■□□□□ 0.62
TUBA3D-201ENST00000321253 DIEXFQ68CQ4 756 aaKnown RBP18.93■□□□□ 0.62
TUBA3D-201ENST00000321253 DLEC1Q9Y238 1755 aa18.92■□□□□ 0.62
TUBA3D-201ENST00000321253 HSP90AB3PQ58FF7 597 aa18.92■□□□□ 0.62
TUBA3D-201ENST00000321253 CCDC30Q5VVM6 783 aa18.92■□□□□ 0.62
TUBA3D-201ENST00000321253 ZNF622Q969S3 477 aaKnown RBP eCLIP18.92■□□□□ 0.62
TUBA3D-201ENST00000321253 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 PARP10Q53GL7 1025 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 ARHGAP27Q6ZUM4 889 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 ZNF34Q8IZ26 560 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 TTLL6Q8N841 843 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 UBN2Q6ZU65 1347 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 FANCIQ9NVI1 1328 aa18.91■□□□□ 0.62
TUBA3D-201ENST00000321253 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 PPP1R42Q7Z4L9 355 aa18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 IBTKQ9P2D0 1353 aaPredicted RBP18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 ANKRD13DQ6ZTN6 518 aa18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 PLBD2Q8NHP8 589 aa18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
TUBA3D-201ENST00000321253 COL11A2P13942 1736 aaPredicted RBP18.89■□□□□ 0.61
TUBA3D-201ENST00000321253 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
TUBA3D-201ENST00000321253 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
TUBA3D-201ENST00000321253 SRGNP10124 158 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 CNKSR1Q969H4 720 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 MASTLQ96GX5 879 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 STK31Q9BXU1 1019 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 ANKRD36CQ5JPF3 1778 aa18.88■□□□□ 0.61
TUBA3D-201ENST00000321253 ERFEQ4G0M1 354 aa18.87■□□□□ 0.61
TUBA3D-201ENST00000321253 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
TUBA3D-201ENST00000321253 ABCC12Q96J65 1359 aa18.86■□□□□ 0.61
TUBA3D-201ENST00000321253 NTSR2O95665 410 aa18.86■□□□□ 0.61
TUBA3D-201ENST00000321253 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
TUBA3D-201ENST00000321253 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
TUBA3D-201ENST00000321253 NPR1P16066 1061 aa18.85■□□□□ 0.61
TUBA3D-201ENST00000321253 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
TUBA3D-201ENST00000321253 ZNF784Q8NCA9 323 aaPredicted RBP18.85■□□□□ 0.61
TUBA3D-201ENST00000321253 KLRG2A4D1S0 409 aaPredicted RBP18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
TUBA3D-201ENST00000321253 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms