RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 CATIPQ7Z7H3 387 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 HOOK3Q86VS8 718 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 SPECC1LQ69YQ0 1117 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
UBE2N-201ENST00000318066 KIF5BP33176 963 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 USP5P45974 858 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 PPP4R3AQ6IN85 833 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 TCP11L1Q9NUJ3 509 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 SSR1P43307 286 aaKnown RBP21.93■■□□□ 1.1
UBE2N-201ENST00000318066 SPAG1Q07617 926 aa21.93■■□□□ 1.1
UBE2N-201ENST00000318066 GSTTP1A0A1W2PQM5 241 aa21.92■■□□□ 1.1
UBE2N-201ENST00000318066 GJB2P29033 226 aa21.92■■□□□ 1.1
UBE2N-201ENST00000318066 C16orf45Q96MC5 204 aaPredicted RBP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 SRRTQ9BXP5 876 aaKnown RBP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 RBM5P52756 815 aaKnown RBP eCLIP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 CKAP4Q07065 602 aaKnown RBP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 TTC22Q5TAA0 569 aa21.92■■□□□ 1.1
UBE2N-201ENST00000318066 POLR3GO15318 223 aaPredicted RBP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 IARSP41252 1262 aaKnown RBP21.92■■□□□ 1.1
UBE2N-201ENST00000318066 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
UBE2N-201ENST00000318066 RMND1Q9NWS8 449 aa21.92■■□□□ 1.1
UBE2N-201ENST00000318066 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 POLR3DP05423 398 aaPredicted RBP21.91■■□□□ 1.1
UBE2N-201ENST00000318066 CLCN1P35523 988 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 MCM10Q7L590 875 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 CALML4Q96GE6 196 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 HS1BP3Q53T59 392 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 TMC6Q7Z403 805 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 CKAP2LQ8IYA6 745 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 CTAGE1Q96RT6 745 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 IFIT3O14879 490 aaKnown RBP21.91■■□□□ 1.1
UBE2N-201ENST00000318066 SPECC1Q5M775 1068 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 TDRD12Q587J7 1177 aaKnown RBP21.91■■□□□ 1.1
UBE2N-201ENST00000318066 CCDC178Q5BJE1 867 aa21.91■■□□□ 1.1
UBE2N-201ENST00000318066 ZNF444Q8N0Y2 327 aaPredicted RBP21.91■■□□□ 1.1
UBE2N-201ENST00000318066 FLIIQ13045 1269 aa21.9■■□□□ 1.1
UBE2N-201ENST00000318066 SCAF11Q99590 1463 aaKnown RBP21.9■■□□□ 1.1
UBE2N-201ENST00000318066 MTIF2P46199 727 aaKnown RBP21.9■■□□□ 1.1
UBE2N-201ENST00000318066 BBXQ8WY36 941 aaPredicted RBP21.9■■□□□ 1.1
UBE2N-201ENST00000318066 MATR3P43243 847 aaKnown RBP eCLIP21.9■■□□□ 1.13e-7■□□□□ 8.1
UBE2N-201ENST00000318066 CUL5Q93034 780 aa21.9■■□□□ 1.1
UBE2N-201ENST00000318066 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
UBE2N-201ENST00000318066 CCDC172P0C7W6 258 aa21.89■■□□□ 1.1
UBE2N-201ENST00000318066 CEP135Q66GS9 1140 aa21.89■■□□□ 1.1
UBE2N-201ENST00000318066 SNX21Q969T3 373 aa21.89■■□□□ 1.1
UBE2N-201ENST00000318066 TEX13AQ9BXU3 409 aaPredicted RBP21.89■■□□□ 1.1
UBE2N-201ENST00000318066 MINDY4BA8MYZ0 360 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 NLRP5P59047 1200 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 MYD88Q99836 296 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 TTC21AQ8NDW8 1320 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 CTR9Q6PD62 1173 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 NEK1Q96PY6 1258 aa21.89■■□□□ 1.09
UBE2N-201ENST00000318066 GTPBP4Q9BZE4 634 aaKnown RBP21.89■■□□□ 1.09
UBE2N-201ENST00000318066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.89■■□□□ 1.094e-6■■□□□ 12.6
UBE2N-201ENST00000318066 CCDC113Q9H0I3 377 aa21.88■■□□□ 1.09
UBE2N-201ENST00000318066 ANKRD18BA2A2Z9 1011 aa21.88■■□□□ 1.09
UBE2N-201ENST00000318066 PRDM10Q9NQV6 1147 aa21.88■■□□□ 1.09
UBE2N-201ENST00000318066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.88■■□□□ 1.09
UBE2N-201ENST00000318066 KRT222Q8N1A0 295 aa21.88■■□□□ 1.09
UBE2N-201ENST00000318066 LDHCP07864 332 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 ZSCAN22P10073 491 aaPredicted RBP21.87■■□□□ 1.09
UBE2N-201ENST00000318066 USP16Q9Y5T5 823 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 KCNG4Q8TDN1 519 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 TUBBP07437 444 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 NCOA7Q8NI08 942 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 PLVAPQ9BX97 442 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 ORC3Q9UBD5 711 aaPredicted RBP21.87■■□□□ 1.09
UBE2N-201ENST00000318066 RALGAPBQ86X10 1494 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 ZFYP08048 801 aaPredicted RBP21.87■■□□□ 1.09
UBE2N-201ENST00000318066 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
UBE2N-201ENST00000318066 THUMPD2Q9BTF0 503 aaKnown RBP21.87■■□□□ 1.09
UBE2N-201ENST00000318066 ANKRD36BQ8N2N9 1353 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 FAM200AQ8TCP9 573 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 FAM135AQ9P2D6 1515 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 TRMT1Q9NXH9 659 aaKnown RBP21.86■■□□□ 1.09
UBE2N-201ENST00000318066 TMOD3Q9NYL9 352 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 SNAPC4Q5SXM2 1469 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 IVLP07476 585 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 DZIP1Q86YF9 867 aaKnown RBP21.86■■□□□ 1.09
UBE2N-201ENST00000318066 NUCB1Q02818 461 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 ZSCAN23Q3MJ62 389 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 TMTC2Q8N394 836 aa21.86■■□□□ 1.09
UBE2N-201ENST00000318066 UBA7P41226 1012 aa21.85■■□□□ 1.09
UBE2N-201ENST00000318066 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 NBPF7P0C2Y1 421 aaPredicted RBP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 HLTFQ14527 1009 aaKnown RBP eCLIP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 CCDC8Q9H0W5 538 aaPredicted RBP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 RANBP6O60518 1105 aaKnown RBP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 CRACR2BQ8N4Y2 399 aaPredicted RBP21.85■■□□□ 1.09
UBE2N-201ENST00000318066 NF2P35240 595 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 CEP112Q8N8E3 955 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 CYLC1P35663 651 aaPredicted RBP21.84■■□□□ 1.09
UBE2N-201ENST00000318066 TRAF1Q13077 416 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 GNG11P61952 73 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 CCDC40Q4G0X9 1142 aa21.84■■□□□ 1.09
UBE2N-201ENST00000318066 RNF187Q5TA31 235 aaPredicted RBP21.84■■□□□ 1.09
UBE2N-201ENST00000318066 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
UBE2N-201ENST00000318066 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.09
UBE2N-201ENST00000318066 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms