RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 LDHAL6AQ6ZMR3 332 aa21.59■■□□□ 1.05
UBXN2A-201ENST00000309033 IFNL2Q8IZJ0 200 aa21.58■■□□□ 1.05
UBXN2A-201ENST00000309033 TAF3Q5VWG9 929 aa21.58■■□□□ 1.05
UBXN2A-201ENST00000309033 PANK2Q9BZ23 570 aa21.58■■□□□ 1.05
UBXN2A-201ENST00000309033 ERICH4A6NGS2 130 aa21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 PDCL2Q8N4E4 241 aa21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 MEIS3Q99687 375 aa21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 TRMT1Q9NXH9 659 aaKnown RBP21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 ANKRD36BQ8N2N9 1353 aa21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 ISM2Q6H9L7 571 aa21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 RPGRQ92834 1020 aaKnown RBP21.58■■□□□ 1.04
UBXN2A-201ENST00000309033 USP16Q9Y5T5 823 aa21.57■■□□□ 1.04
UBXN2A-201ENST00000309033 CHPF2Q9P2E5 772 aa21.57■■□□□ 1.04
UBXN2A-201ENST00000309033 KIAA0754O94854 1291 aa21.57■■□□□ 1.04
UBXN2A-201ENST00000309033 SPA17Q15506 151 aa21.57■■□□□ 1.04
UBXN2A-201ENST00000309033 EXOC5O00471 708 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 CASQ1P31415 396 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 DNA2P51530 1060 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 NUCB1Q02818 461 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 CATIPQ7Z7H3 387 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 TBC1D32Q96NH3 1257 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 TMEM67Q5HYA8 995 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 FKBP15Q5T1M5 1219 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 RNF41Q9H4P4 317 aaPredicted RBP21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 MICU3Q86XE3 530 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 DHX29Q7Z478 1369 aaKnown RBP21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 CCDC194A0A1B0GVG4 234 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
UBXN2A-201ENST00000309033 URI1O94763 535 aaPredicted RBP21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 TSG101Q99816 390 aa21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 BAG4O95429 457 aaKnown RBP21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 CACNA2D4Q7Z3S7 1137 aa21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 ZSCAN12O43309 604 aa21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 DDX46Q7L014 1031 aaKnown RBP21.55■■□□□ 1.04
UBXN2A-201ENST00000309033 SDSP20132 328 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 NUP88Q99567 741 aaPredicted RBP21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 PLCD4Q9BRC7 762 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 PHAXQ9H814 394 aaKnown RBP21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 PCDHB15Q9Y5E8 787 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 DENND4BO75064 1496 aaPredicted RBP21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 CHMP4BP1P59074 171 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 NECAB1Q8N987 351 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 IL16Q14005 1332 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 DCAF8L1A6NGE4 600 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 PPP1R12BO60237 982 aaPredicted RBP21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 JAKMIP3Q5VZ66 844 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 VAT1LQ9HCJ6 419 aa21.54■■□□□ 1.04
UBXN2A-201ENST00000309033 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
UBXN2A-201ENST00000309033 KIF5CO60282 957 aa21.53■■□□□ 1.04
UBXN2A-201ENST00000309033 IARSP41252 1262 aaKnown RBP21.53■■□□□ 1.04
UBXN2A-201ENST00000309033 TNIP1Q15025 636 aa21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 LRRC2Q9BYS8 371 aa21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 CTAGE5O15320 804 aa21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 C16orf45Q96MC5 204 aaPredicted RBP21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 ORC3Q9UBD5 711 aaPredicted RBP21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 TTF1Q15361 905 aaPredicted RBP21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 KIF4BQ2VIQ3 1234 aa21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 DDX19AQ9NUU7 478 aaKnown RBP21.52■■□□□ 1.04
UBXN2A-201ENST00000309033 C6orf229H3BNL8 230 aa21.52■■□□□ 1.03
UBXN2A-201ENST00000309033 TMC6Q7Z403 805 aa21.52■■□□□ 1.03
UBXN2A-201ENST00000309033 TCEANC2Q96MN5 208 aa21.52■■□□□ 1.03
UBXN2A-201ENST00000309033 SLC26A6Q9BXS9 759 aa21.52■■□□□ 1.03
UBXN2A-201ENST00000309033 ADCY5O95622 1261 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 METAP2P50579 478 aaKnown RBP eCLIP21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 TMCO3Q6UWJ1 677 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 C8orf58Q8NAV2 365 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 TMEM266Q2M3C6 531 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 ANKRD13DQ6ZTN6 518 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 TRMT1LQ7Z2T5 733 aaKnown RBP21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 KIF18AQ8NI77 898 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 TMX3Q96JJ7 454 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 ZRANB1Q9UGI0 708 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 TNNQ9UQP3 1299 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
UBXN2A-201ENST00000309033 C16orf71Q8IYS4 520 aaPredicted RBP21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 GPATCH8Q9UKJ3 1502 aaKnown RBP21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 MFSD6Q6ZSS7 791 aa21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 NGLY1Q96IV0 654 aa21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 HDAC1Q13547 482 aaPredicted RBP21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 TNNT1P13805 278 aa21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 STX1AQ16623 288 aa21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 NCOA7Q8NI08 942 aa21.5■■□□□ 1.03
UBXN2A-201ENST00000309033 ASXL1Q8IXJ9 1541 aa21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 PRKCSHP14314 528 aaPredicted RBP21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 TSPY2A6NKD2 308 aa21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 CUL5Q93034 780 aa21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 ANKRD18AQ8IVF6 992 aa21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 MRPL50Q8N5N7 158 aaKnown RBP21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.49■■□□□ 1.03
UBXN2A-201ENST00000309033 RALGAPBQ86X10 1494 aa21.48■■□□□ 1.03
UBXN2A-201ENST00000309033 XAGE3Q8WTP9 111 aa21.48■■□□□ 1.03
UBXN2A-201ENST00000309033 BRF1Q92994 677 aa21.48■■□□□ 1.03
UBXN2A-201ENST00000309033 PPIP5K1Q6PFW1 1433 aa21.48■■□□□ 1.03
UBXN2A-201ENST00000309033 CBX1P83916 185 aa21.48■■□□□ 1.03
UBXN2A-201ENST00000309033 RAB34Q9BZG1 259 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms