RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NGEFQ8N5V2 710 aa34.54■■■■□ 3.12
CDKN2A-201ENST00000304494 APAF1O14727 1248 aa34.53■■■■□ 3.12
CDKN2A-201ENST00000304494 ST5P78524 1137 aa34.53■■■■□ 3.12
CDKN2A-201ENST00000304494 KIF6Q6ZMV9 814 aa34.53■■■■□ 3.12
CDKN2A-201ENST00000304494 ERVV-1B6SEH8 477 aa34.52■■■■□ 3.12
CDKN2A-201ENST00000304494 DLEC1Q9Y238 1755 aa34.51■■■■□ 3.12
CDKN2A-201ENST00000304494 ADCY9O60503 1353 aa34.51■■■■□ 3.12
CDKN2A-201ENST00000304494 NBPF5PQ86XG9 351 aaPredicted RBP34.51■■■■□ 3.12
CDKN2A-201ENST00000304494 NIP7Q9Y221 180 aaKnown RBP eCLIP34.51■■■■□ 3.12
CDKN2A-201ENST00000304494 ATP10DQ9P241 1426 aa34.5■■■■□ 3.11
CDKN2A-201ENST00000304494 EIF2S2P20042 333 aaKnown RBP34.5■■■■□ 3.11
CDKN2A-201ENST00000304494 CCDC184Q52MB2 194 aa34.5■■■■□ 3.11
CDKN2A-201ENST00000304494 MAP3K15Q6ZN16 1313 aa34.5■■■■□ 3.11
CDKN2A-201ENST00000304494 CALD1Q05682 793 aaKnown RBP34.49■■■■□ 3.11
CDKN2A-201ENST00000304494 HLFQ16534 295 aa34.49■■■■□ 3.11
CDKN2A-201ENST00000304494 CFAP44Q96MT7 982 aa34.49■■■■□ 3.11
CDKN2A-201ENST00000304494 TTLL6Q8N841 843 aa34.48■■■■□ 3.11
CDKN2A-201ENST00000304494 TPTE2Q6XPS3 522 aa34.47■■■■□ 3.11
CDKN2A-201ENST00000304494 CCDC24Q8N4L8 307 aa34.47■■■■□ 3.11
CDKN2A-201ENST00000304494 ANKRD31Q8N7Z5 1873 aa34.47■■■■□ 3.11
CDKN2A-201ENST00000304494 TTLL7Q6ZT98 887 aa34.46■■■■□ 3.11
CDKN2A-201ENST00000304494 MRS2Q9HD23 443 aa34.45■■■■□ 3.11
CDKN2A-201ENST00000304494 PDIA6Q15084 440 aa34.44■■■■□ 3.1
CDKN2A-201ENST00000304494 ZNF622Q969S3 477 aaKnown RBP eCLIP34.43■■■■□ 3.1
CDKN2A-201ENST00000304494 HOXB7P09629 217 aa34.42■■■■□ 3.1
CDKN2A-201ENST00000304494 ZBTB3Q9H5J0 574 aa34.42■■■■□ 3.1
CDKN2A-201ENST00000304494 KRT24Q2M2I5 525 aa34.41■■■■□ 3.1
CDKN2A-201ENST00000304494 LRP10Q7Z4F1 713 aa34.41■■■■□ 3.1
CDKN2A-201ENST00000304494 IFT57Q9NWB7 429 aa34.41■■■■□ 3.1
CDKN2A-201ENST00000304494 GNAI1P63096 354 aa34.4■■■■□ 3.1
CDKN2A-201ENST00000304494 NYXQ9GZU5 481 aa34.4■■■■□ 3.1
CDKN2A-201ENST00000304494 GPBP1L1Q9HC44 474 aaPredicted RBP34.4■■■■□ 3.1
CDKN2A-201ENST00000304494 MBIPQ9NS73 344 aa34.4■■■■□ 3.1
CDKN2A-201ENST00000304494 COL11A2P13942 1736 aaPredicted RBP34.39■■■■□ 3.1
CDKN2A-201ENST00000304494 ZNF853P0CG23 659 aa34.39■■■■□ 3.1
CDKN2A-201ENST00000304494 STYK1Q6J9G0 422 aa34.39■■■■□ 3.1
CDKN2A-201ENST00000304494 NECTIN2Q92692 538 aa34.39■■■■□ 3.1
CDKN2A-201ENST00000304494 FAM177BA6PVY3 158 aa34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 SRGNP10124 158 aa34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 GTF2E1P29083 439 aaPredicted RBP34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 PROSER3Q2NL68 480 aa34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 GIGYF2Q6Y7W6 1299 aaKnown RBP34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 DDX21Q9NR30 783 aaKnown RBP eCLIP34.38■■■■□ 3.09
CDKN2A-201ENST00000304494 NUP98P52948 1817 aa34.37■■■■□ 3.09
CDKN2A-201ENST00000304494 CNKSR1Q969H4 720 aa34.37■■■■□ 3.09
CDKN2A-201ENST00000304494 MASTLQ96GX5 879 aa34.37■■■■□ 3.09
CDKN2A-201ENST00000304494 HDGFL1Q5TGJ6 251 aa34.36■■■■□ 3.09
CDKN2A-201ENST00000304494 C9orf131Q5VYM1 1079 aa34.36■■■■□ 3.09
CDKN2A-201ENST00000304494 ZNF526Q8TF50 670 aaPredicted RBP34.36■■■■□ 3.09
CDKN2A-201ENST00000304494 ANXA1P04083 346 aa34.35■■■■□ 3.09
CDKN2A-201ENST00000304494 IBTKQ9P2D0 1353 aaPredicted RBP34.34■■■■□ 3.09
CDKN2A-201ENST00000304494 KLRG2A4D1S0 409 aaPredicted RBP34.33■■■■□ 3.09
CDKN2A-201ENST00000304494 GPTP24298 496 aa34.33■■■■□ 3.09
CDKN2A-201ENST00000304494 DUSP27Q5VZP5 1158 aa34.33■■■■□ 3.09
CDKN2A-201ENST00000304494 COPS6Q7L5N1 327 aa34.33■■■■□ 3.09
CDKN2A-201ENST00000304494 ZNF34Q8IZ26 560 aa34.33■■■■□ 3.09
CDKN2A-201ENST00000304494 CCDC27Q2M243 656 aa34.32■■■■□ 3.08
CDKN2A-201ENST00000304494 RNF181Q9P0P0 153 aa34.32■■■■□ 3.08
CDKN2A-201ENST00000304494 CHPF2Q9P2E5 772 aa34.32■■■■□ 3.08
CDKN2A-201ENST00000304494 NPR1P16066 1061 aa34.31■■■■□ 3.08
CDKN2A-201ENST00000304494 XAGE3Q8WTP9 111 aa34.31■■■■□ 3.08
CDKN2A-201ENST00000304494 DBF4Q9UBU7 674 aaPredicted RBP34.31■■■■□ 3.08
CDKN2A-201ENST00000304494 UBN2Q6ZU65 1347 aa34.3■■■■□ 3.08
CDKN2A-201ENST00000304494 AIMP1Q12904 312 aaKnown RBP34.3■■■■□ 3.08
CDKN2A-201ENST00000304494 PARP10Q53GL7 1025 aa34.3■■■■□ 3.08
CDKN2A-201ENST00000304494 C1QTNF8P60827 252 aa34.29■■■■□ 3.08
CDKN2A-201ENST00000304494 NCBP3Q53F19 620 aaKnown RBP34.29■■■■□ 3.08
CDKN2A-201ENST00000304494 HSP90AB3PQ58FF7 597 aa34.29■■■■□ 3.08
CDKN2A-201ENST00000304494 PRPF40BQ6NWY9 871 aaKnown RBP34.29■■■■□ 3.08
CDKN2A-201ENST00000304494 PPP1R42Q7Z4L9 355 aa34.29■■■■□ 3.08
CDKN2A-201ENST00000304494 C21orf2O43822 256 aa34.28■■■■□ 3.08
CDKN2A-201ENST00000304494 RASSF7Q02833 373 aa34.28■■■■□ 3.08
CDKN2A-201ENST00000304494 SUSD4Q5VX71 490 aa34.28■■■■□ 3.08
CDKN2A-201ENST00000304494 NUTM1Q86Y26 1132 aa34.28■■■■□ 3.08
CDKN2A-201ENST00000304494 SOGA3Q5TF21 947 aa34.27■■■■□ 3.08
CDKN2A-201ENST00000304494 LMNB1P20700 586 aa34.26■■■■□ 3.08
CDKN2A-201ENST00000304494 ERFEQ4G0M1 354 aa34.26■■■■□ 3.08
CDKN2A-201ENST00000304494 HYPKQ9NX55 129 aa34.26■■■■□ 3.08
CDKN2A-201ENST00000304494 ZNF219Q9P2Y4 722 aaPredicted RBP34.26■■■■□ 3.08
CDKN2A-201ENST00000304494 ABCC12Q96J65 1359 aa34.25■■■■□ 3.07
CDKN2A-201ENST00000304494 RIC1Q4ADV7 1423 aa34.25■■■■□ 3.07
CDKN2A-201ENST00000304494 WWC1Q8IX03 1113 aa34.25■■■■□ 3.07
CDKN2A-201ENST00000304494 ARFGEF2Q9Y6D5 1785 aa34.25■■■■□ 3.07
CDKN2A-201ENST00000304494 NTSR2O95665 410 aa34.24■■■■□ 3.07
CDKN2A-201ENST00000304494 CHMP4AQ9BY43 222 aa34.24■■■■□ 3.07
CDKN2A-201ENST00000304494 SBF1O95248 1867 aa34.24■■■■□ 3.07
CDKN2A-201ENST00000304494 ZC3H4Q9UPT8 1303 aaKnown RBP34.24■■■■□ 3.07
CDKN2A-201ENST00000304494 NFKBIEO00221 500 aa34.23■■■■□ 3.07
CDKN2A-201ENST00000304494 ALDH1B1P30837 517 aa34.22■■■■□ 3.07
CDKN2A-201ENST00000304494 CRY2Q49AN0 593 aa34.22■■■■□ 3.07
CDKN2A-201ENST00000304494 UTP14AQ9BVJ6 771 aaKnown RBP34.22■■■■□ 3.07
CDKN2A-201ENST00000304494 SLX4Q8IY92 1834 aa34.21■■■■□ 3.07
CDKN2A-201ENST00000304494 PLBD2Q8NHP8 589 aa34.21■■■■□ 3.07
CDKN2A-201ENST00000304494 RNF123Q5XPI4 1314 aa34.21■■■■□ 3.07
CDKN2A-201ENST00000304494 TNRC6CQ9HCJ0 1690 aaKnown RBP34.2■■■■□ 3.07
CDKN2A-201ENST00000304494 ELL2O00472 640 aaPredicted RBP34.2■■■■□ 3.07
CDKN2A-201ENST00000304494 TCIRG1Q13488 830 aa34.2■■■■□ 3.07
CDKN2A-201ENST00000304494 CACNA1SQ13698 1873 aa34.2■■■■□ 3.06
CDKN2A-201ENST00000304494 ANKRD36CQ5JPF3 1778 aa34.19■■■■□ 3.06
CDKN2A-201ENST00000304494 SENP3-EIF4A1A0A087X0R7 540 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms