RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ABCC1P33527 1531 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
CASC4-201ENST00000299957 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
CASC4-201ENST00000299957 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 CABLES1Q8TDN4 633 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 A0A087WWV3 80 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 HIP1O00291 1037 aa15.68■□□□□ 0.1
CASC4-201ENST00000299957 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
CASC4-201ENST00000299957 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 SNX14Q9Y5W7 946 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 ANKRD1Q15327 319 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 XAGE3Q8WTP9 111 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
CASC4-201ENST00000299957 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 NUP133Q8WUM0 1156 aa15.67■□□□□ 0.1
CASC4-201ENST00000299957 KIF2CQ99661 725 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 FSIP1Q8NA03 581 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 NOL7Q9UMY1 257 aaKnown RBP15.66■□□□□ 0.1
CASC4-201ENST00000299957 SYNMO15061 1565 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 ATF3P18847 181 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 GPTP24298 496 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
CASC4-201ENST00000299957 ATP7AQ04656 1500 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 RAD21O60216 631 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 PTH1RQ03431 593 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
CASC4-201ENST00000299957 SCAND2PQ9GZW5 306 aaPredicted RBP15.65■□□□□ 0.1
CASC4-201ENST00000299957 ZNF445P59923 1031 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
CASC4-201ENST00000299957 NAT10Q9H0A0 1025 aaKnown RBP15.65■□□□□ 0.1
CASC4-201ENST00000299957 SH2B1Q9NRF2 756 aaPredicted RBP15.65■□□□□ 0.1
CASC4-201ENST00000299957 PIK3R4Q99570 1358 aa15.64■□□□□ 0.1
CASC4-201ENST00000299957 CFAP45Q9UL16 551 aa15.64■□□□□ 0.09
CASC4-201ENST00000299957 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
CASC4-201ENST00000299957 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.09
CASC4-201ENST00000299957 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
CASC4-201ENST00000299957 NEK1Q96PY6 1258 aa15.64■□□□□ 0.09
CASC4-201ENST00000299957 ABCA8O94911 1581 aa15.64■□□□□ 0.09
CASC4-201ENST00000299957 IFIT1P09914 478 aaKnown RBP15.64■□□□□ 0.09
CASC4-201ENST00000299957 NCOA5Q9HCD5 579 aaKnown RBP15.64■□□□□ 0.09
CASC4-201ENST00000299957 RXRAP19793 462 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 ADCK5Q3MIX3 580 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 CFAP100Q494V2 611 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 Q6ZUG5 572 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 MTERF4Q7Z6M4 381 aaKnown RBP15.63■□□□□ 0.09
CASC4-201ENST00000299957 CEP57L1Q8IYX8 460 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 NFATC2IPQ8NCF5 419 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 JAK2O60674 1132 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 KCNA6P17658 529 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 KLHL10Q6JEL2 608 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 ZNF396Q96N95 335 aaPredicted RBP15.63■□□□□ 0.09
CASC4-201ENST00000299957 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
CASC4-201ENST00000299957 BRD1O95696 1058 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 TIMM10P62072 90 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 TYRO3Q06418 890 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 PTPN14Q15678 1187 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 ZSWIM4Q9H7M6 989 aa15.63■□□□□ 0.09
CASC4-201ENST00000299957 GRM8O00222 908 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 CCDC158Q5M9N0 1113 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 CCAR1Q8IX12 1150 aaKnown RBP15.62■□□□□ 0.09
CASC4-201ENST00000299957 PCMTD1Q96MG8 357 aaPredicted RBP15.62■□□□□ 0.09
CASC4-201ENST00000299957 SGSM2O43147 1006 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 VPS37DQ86XT2 251 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 PUS7Q96PZ0 661 aaKnown RBP15.62■□□□□ 0.09
CASC4-201ENST00000299957 TPM3P06753 285 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 CDC37L1Q7L3B6 337 aa15.62■□□□□ 0.09
CASC4-201ENST00000299957 PRAMEF22A3QJZ6 481 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 MARCKSP29966 332 aaPredicted RBP15.61■□□□□ 0.09
CASC4-201ENST00000299957 ANAPC15P60006 121 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 APOBRQ0VD83 1088 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 ANKRD24Q8TF21 1146 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 LRMPQ12912 555 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 CDC42BPAQ5VT25 1732 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 TRPM1Q7Z4N2 1603 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 SAFBQ15424 915 aaKnown RBP eCLIP15.61■□□□□ 0.09
CASC4-201ENST00000299957 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
CASC4-201ENST00000299957 HOXC9P31274 260 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 SLC4A8Q2Y0W8 1093 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
CASC4-201ENST00000299957 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 ARHGEF5Q12774 1597 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 DYNC1I1O14576 645 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 ANKRD13DQ6ZTN6 518 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
CASC4-201ENST00000299957 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 NBPF6Q5VWK0 638 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 TMC6Q7Z403 805 aa15.6■□□□□ 0.09
CASC4-201ENST00000299957 NBPF4Q96M43 638 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms