RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 DYNC1I1O14576 645 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 ZNF500O60304 480 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 PTGS1P23219 599 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 PSME1Q06323 249 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 KIF3AQ9Y496 699 aa15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
TNFRSF21-201ENST00000296861 BECN2A8MW95 431 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 GOLGA6L6A8MZA4 724 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 CCDC192P0DO97 292 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 NUP62CLQ9H1M0 184 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 UBE2HP62256 183 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 SPATA32Q96LK8 384 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 DACT1Q9NYF0 836 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 ROBO2Q9HCK4 1378 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 ATP10DQ9P241 1426 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 KRT85P78386 507 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 CCDC85AQ96PX6 553 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF21-201ENST00000296861 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 PRAMEF22A3QJZ6 481 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 GOLGA6L19H0YKK7 550 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 SGSM2O43147 1006 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 ESCO1Q5FWF5 840 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 CCDC186Q7Z3E2 898 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 RBM8AQ9Y5S9 174 aaKnown RBP15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 GLRX3O76003 335 aaKnown RBP15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 LRMPQ12912 555 aa15.84■□□□□ 0.13
TNFRSF21-201ENST00000296861 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF21-201ENST00000296861 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF21-201ENST00000296861 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.12
TNFRSF21-201ENST00000296861 HSPA4P34932 840 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 CCT2P78371 535 aaKnown RBP15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 CLEC17AQ6ZS10 378 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 MTERF4Q7Z6M4 381 aaKnown RBP15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 PYCARDQ9ULZ3 195 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 IBTKQ9P2D0 1353 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 CDC37L1Q7L3B6 337 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 PDLIM2Q96JY6 352 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 KCNA6P17658 529 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 LIG1P18858 919 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 MCM5P33992 734 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 MAP3K11Q16584 847 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 MED14O60244 1454 aa15.82■□□□□ 0.12
TNFRSF21-201ENST00000296861 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ANO6Q4KMQ2 910 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 INTS4Q96HW7 963 aaKnown RBP15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ANAPC15P60006 121 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ME3Q16798 604 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 CCDC129Q6ZRS4 1044 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ARHGEF28Q8N1W1 1705 aaKnown RBP15.81■□□□□ 0.12
TNFRSF21-201ENST00000296861 ATP5J2-PTCD1G3V325 749 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 CHGBP05060 677 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 PDCL2Q8N4E4 241 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 CUL4AQ13619 759 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 HSP90AB4PQ58FF6 505 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 ZC3H13Q5T200 1668 aaKnown RBP15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 GORABQ5T7V8 394 aa15.8■□□□□ 0.12
TNFRSF21-201ENST00000296861 RAD50Q92878 1312 aa15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 JAK2O60674 1132 aa15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 TERF1P54274 439 aa15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 ZNF771Q7L3S4 317 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.126e-9■□□□□ 9.9
TNFRSF21-201ENST00000296861 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 OSBPL3Q9H4L5 887 aa15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 TLR7Q9NYK1 1049 aaKnown RBP15.79■□□□□ 0.12
TNFRSF21-201ENST00000296861 NLRP2Q9NX02 1062 aa15.78■□□□□ 0.12
TNFRSF21-201ENST00000296861 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
TNFRSF21-201ENST00000296861 RIOK3O14730 519 aaKnown RBP15.78■□□□□ 0.12
TNFRSF21-201ENST00000296861 HMGN5P82970 282 aaKnown RBP15.78■□□□□ 0.12
TNFRSF21-201ENST00000296861 CPS1P31327 1500 aa15.78■□□□□ 0.12
TNFRSF21-201ENST00000296861 HOXC9P31274 260 aa15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 CREB3L3Q68CJ9 461 aa15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 TTC6Q86TZ1 520 aa15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 ZNF165P49910 485 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms