RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 KIAA1524Q8TCG1 905 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
CCDC36-201ENST00000296449 TPM3P06753 285 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 ADCK5Q3MIX3 580 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 VPS53Q5VIR6 699 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
CCDC36-201ENST00000296449 PTH1RQ03431 593 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 FAM177BA6PVY3 158 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 JAKMIP1Q96N16 626 aaKnown RBP12.18□□□□□ -0.46
CCDC36-201ENST00000296449 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
CCDC36-201ENST00000296449 NWD1Q149M9 1564 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
CCDC36-201ENST00000296449 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
CCDC36-201ENST00000296449 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
CCDC36-201ENST00000296449 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
CCDC36-201ENST00000296449 KCNB2Q92953 911 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 TM6SF1Q9BZW5 370 aa12.17□□□□□ -0.46
CCDC36-201ENST00000296449 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
CCDC36-201ENST00000296449 CCDC192P0DO97 292 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 ME3Q16798 604 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 TNRQ92752 1358 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
CCDC36-201ENST00000296449 HOXC9P31274 260 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
CCDC36-201ENST00000296449 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
CCDC36-201ENST00000296449 PIK3C2AO00443 1686 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
CCDC36-201ENST00000296449 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
CCDC36-201ENST00000296449 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
CCDC36-201ENST00000296449 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
CCDC36-201ENST00000296449 UBR1Q8IWV7 1749 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 PI4KAP2A4QPH2 592 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 TTC6Q86TZ1 520 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 PI4KAP1Q8N8J0 262 aa12.15□□□□□ -0.46
CCDC36-201ENST00000296449 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
CCDC36-201ENST00000296449 DIP2BQ9P265 1576 aa12.15□□□□□ -0.47
CCDC36-201ENST00000296449 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
CCDC36-201ENST00000296449 LTKP29376 864 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
CCDC36-201ENST00000296449 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 CHPF2Q9P2E5 772 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
CCDC36-201ENST00000296449 NLRP6P59044 892 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
CCDC36-201ENST00000296449 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
CCDC36-201ENST00000296449 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 LIG1P18858 919 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 DMTNQ08495 405 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
CCDC36-201ENST00000296449 SLC26A8Q96RN1 970 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 ELP1O95163 1332 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CCDC36-201ENST00000296449 KRT85P78386 507 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 TYRO3Q06418 890 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 MTX1Q13505 466 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
CCDC36-201ENST00000296449 LTV1Q96GA3 475 aaPredicted RBP12.13□□□□□ -0.47
CCDC36-201ENST00000296449 NUP62CLQ9H1M0 184 aa12.13□□□□□ -0.47
CCDC36-201ENST00000296449 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
CCDC36-201ENST00000296449 CBX1P83916 185 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
CCDC36-201ENST00000296449 COL9A3Q14050 684 aaPredicted RBP12.12□□□□□ -0.47
CCDC36-201ENST00000296449 CAMK4Q16566 473 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 CHMP3Q9Y3E7 222 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 RBM8AQ9Y5S9 174 aaKnown RBP12.12□□□□□ -0.47
CCDC36-201ENST00000296449 ADCY9O60503 1353 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 PTGS1P23219 599 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
CCDC36-201ENST00000296449 ANXA1P04083 346 aa12.11□□□□□ -0.47
CCDC36-201ENST00000296449 HOXB7P09629 217 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms