RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TBC1D5Q92609 795 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 VIMP08670 466 aaKnown RBP18.06■□□□□ 0.48
UBR3-201ENST00000272793 NCAPGQ9BPX3 1015 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 SELENOOQ9BVL4 669 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.06■□□□□ 0.481e-5■■■■□ 19.8
UBR3-201ENST00000272793 CCDC114Q96M63 670 aa18.06■□□□□ 0.48
UBR3-201ENST00000272793 UTP14AQ9BVJ6 771 aaKnown RBP18.06■□□□□ 0.48
UBR3-201ENST00000272793 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 ZEB2O60315 1214 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 MCM4P33991 863 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
UBR3-201ENST00000272793 TTC12Q9H892 705 aaPredicted RBP18.05■□□□□ 0.48
UBR3-201ENST00000272793 RASAL2Q9UJF2 1139 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 FRMD4BQ9Y2L6 1034 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 USP47Q96K76 1375 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 IFI16Q16666 785 aaKnown RBP18.05■□□□□ 0.48
UBR3-201ENST00000272793 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 TMEM110-MUSTN1A8MSY1 372 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 WASF1Q92558 559 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 STMN4Q9H169 189 aaPredicted RBP18.05■□□□□ 0.48
UBR3-201ENST00000272793 GOLIM4O00461 696 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 DPH6Q7L8W6 267 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 BICD1Q96G01 975 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 GNAI1P63096 354 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 CALCOCO2Q13137 446 aa18.05■□□□□ 0.48
UBR3-201ENST00000272793 CPLX4Q7Z7G2 160 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 SMIM24O75264 130 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 ZBTB41Q5SVQ8 909 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 MVPQ14764 893 aaKnown RBP18.04■□□□□ 0.48
UBR3-201ENST00000272793 CEP128Q6ZU80 1094 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 HSPA1LP34931 641 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 KCNK9Q9NPC2 374 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
UBR3-201ENST00000272793 SAMM50Q9Y512 469 aa18.04■□□□□ 0.48
UBR3-201ENST00000272793 KIF20AO95235 890 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 LACTBP83111 547 aaPredicted RBP18.03■□□□□ 0.48
UBR3-201ENST00000272793 SDCCAG8Q86SQ7 713 aaPredicted RBP18.03■□□□□ 0.48
UBR3-201ENST00000272793 CACNA2D3Q8IZS8 1091 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 TXNDC9O14530 226 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 GBP1P32455 592 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 SYF2O95926 243 aaKnown RBP18.03■□□□□ 0.48
UBR3-201ENST00000272793 PDIA4P13667 645 aaKnown RBP18.03■□□□□ 0.48
UBR3-201ENST00000272793 ZRANB2O95218 330 aaKnown RBP eCLIP18.03■□□□□ 0.48
UBR3-201ENST00000272793 MIER3Q7Z3K6 550 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 TBC1D31Q96DN5 1066 aa18.03■□□□□ 0.48
UBR3-201ENST00000272793 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
UBR3-201ENST00000272793 GOLGA8AA7E2F4 631 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 PPP2R5CQ13362 524 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 TTC14Q96N46 770 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 LRP2BPQ9P2M1 347 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 BIRC2Q13490 618 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 CUL5Q93034 780 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 RAB34Q9BZG1 259 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 ZSCAN25Q6NSZ9 544 aa18.02■□□□□ 0.48
UBR3-201ENST00000272793 RAB3IPQ96QF0 476 aaPredicted RBP18.02■□□□□ 0.48
UBR3-201ENST00000272793 ERCC6LQ2NKX8 1250 aa18.02■□□□□ 0.47
UBR3-201ENST00000272793 GKAP1Q5VSY0 366 aaPredicted RBP18.02■□□□□ 0.47
UBR3-201ENST00000272793 JAKMIP1Q96N16 626 aaKnown RBP18.02■□□□□ 0.47
UBR3-201ENST00000272793 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.47
UBR3-201ENST00000272793 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.47
UBR3-201ENST00000272793 BLOC1S2Q6QNY1 142 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 BUB1BO60566 1050 aaPredicted RBP18.01■□□□□ 0.47
UBR3-201ENST00000272793 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 MRPL46Q9H2W6 279 aaKnown RBP18.01■□□□□ 0.47
UBR3-201ENST00000272793 IRX5P78411 483 aaPredicted RBP18.01■□□□□ 0.47
UBR3-201ENST00000272793 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 CCDC25Q86WR0 208 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
UBR3-201ENST00000272793 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 ATP2B3Q16720 1220 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 CCDC50Q8IVM0 306 aa18.01■□□□□ 0.47
UBR3-201ENST00000272793 GJC1P36383 396 aa18■□□□□ 0.47
UBR3-201ENST00000272793 SNW1Q13573 536 aaKnown RBP18■□□□□ 0.47
UBR3-201ENST00000272793 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
UBR3-201ENST00000272793 NEDD9Q14511 834 aa18■□□□□ 0.47
UBR3-201ENST00000272793 PDRG1Q9NUG6 133 aa18■□□□□ 0.47
UBR3-201ENST00000272793 FAM169AQ9Y6X4 670 aa18■□□□□ 0.47
UBR3-201ENST00000272793 CCDC172P0C7W6 258 aa18■□□□□ 0.47
UBR3-201ENST00000272793 ANO10Q9NW15 660 aa18■□□□□ 0.47
UBR3-201ENST00000272793 WDR46O15213 610 aaKnown RBP18■□□□□ 0.47
UBR3-201ENST00000272793 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
UBR3-201ENST00000272793 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
UBR3-201ENST00000272793 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
UBR3-201ENST00000272793 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 VPS41P49754 854 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 UAP1Q16222 522 aaPredicted RBP17.99■□□□□ 0.47
UBR3-201ENST00000272793 ARHGEF2Q92974 986 aaKnown RBP17.99■□□□□ 0.47
UBR3-201ENST00000272793 VTI1AQ96AJ9 217 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 ARFGAP3Q9NP61 516 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 MAK16Q9BXY0 300 aaKnown RBP17.99■□□□□ 0.47
UBR3-201ENST00000272793 ZBTB17Q13105 803 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 ISM2Q6H9L7 571 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 PROCA1Q8NCQ7 364 aaPredicted RBP17.99■□□□□ 0.47
UBR3-201ENST00000272793 MKNK2Q9HBH9 465 aa17.99■□□□□ 0.47
UBR3-201ENST00000272793 CRACR2BQ8N4Y2 399 aaPredicted RBP17.99■□□□□ 0.47
UBR3-201ENST00000272793 NLRP5P59047 1200 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 HMGB1P1B2RPK0 211 aaPredicted RBP17.98■□□□□ 0.47
UBR3-201ENST00000272793 GIPC1O14908 333 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms