RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 NME9Q86XW9 330 aa7.12□□□□□ -1.27
ITCH-201ENST00000262650 GOLGA6AQ9NYA3 693 aa7.12□□□□□ -1.27
ITCH-201ENST00000262650 DHX16O60231 1041 aaKnown RBP7.12□□□□□ -1.27
ITCH-201ENST00000262650 SLC4A2P04920 1241 aa7.12□□□□□ -1.27
ITCH-201ENST00000262650 MRRFQ96E11 262 aaKnown RBP7.12□□□□□ -1.27
ITCH-201ENST00000262650 FAM117AQ9C073 453 aa7.12□□□□□ -1.27
ITCH-201ENST00000262650 SH3BP5O60239 455 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
ITCH-201ENST00000262650 SCP2P22307 547 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 CSPP1Q1MSJ5 1256 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 CC2D1BQ5T0F9 858 aaKnown RBP7.11□□□□□ -1.27
ITCH-201ENST00000262650 GET4Q7L5D6 327 aaPredicted RBP7.11□□□□□ -1.27
ITCH-201ENST00000262650 MPNDQ8N594 471 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 SPOCK2Q92563 424 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 VTI1AQ96AJ9 217 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 CARD11Q9BXL7 1154 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 MTFR1LQ9H019 292 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 KIAA1551Q9HCM1 1747 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 TCF3P15923 654 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 KCNA1Q09470 495 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 DDX10Q13206 875 aaKnown RBP7.11□□□□□ -1.27
ITCH-201ENST00000262650 ANKRD24Q8TF21 1146 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 SLC16A10Q8TF71 515 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 MEGF6O75095 1541 aa7.11□□□□□ -1.27
ITCH-201ENST00000262650 COL5A3P25940 1745 aaPredicted RBP7.1□□□□□ -1.27
ITCH-201ENST00000262650 CCDC194A0A1B0GVG4 234 aa7.1□□□□□ -1.27
ITCH-201ENST00000262650 WDR78Q5VTH9 848 aa7.1□□□□□ -1.27
ITCH-201ENST00000262650 SLC12A5Q9H2X9 1139 aa7.1□□□□□ -1.27
ITCH-201ENST00000262650 STK32BQ9NY57 414 aa7.1□□□□□ -1.27
ITCH-201ENST00000262650 TCERG1O14776 1098 aaKnown RBP7.1□□□□□ -1.27
ITCH-201ENST00000262650 HDAC1Q13547 482 aaPredicted RBP7.1□□□□□ -1.27
ITCH-201ENST00000262650 TSR1Q2NL82 804 aaKnown RBP7.1□□□□□ -1.27
ITCH-201ENST00000262650 METTL14Q9HCE5 456 aaKnown RBP7.1□□□□□ -1.27
ITCH-201ENST00000262650 C4BP0C0L5 1744 aa7.09□□□□□ -1.27
ITCH-201ENST00000262650 HMGB2P26583 209 aaKnown RBP7.09□□□□□ -1.27
ITCH-201ENST00000262650 HOXC9P31274 260 aa7.09□□□□□ -1.27
ITCH-201ENST00000262650 MSL3Q8N5Y2 521 aaKnown RBP7.09□□□□□ -1.27
ITCH-201ENST00000262650 INSRP06213 1382 aa7.09□□□□□ -1.27
ITCH-201ENST00000262650 TONSLQ96HA7 1378 aa7.09□□□□□ -1.27
ITCH-201ENST00000262650 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
ITCH-201ENST00000262650 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.28
ITCH-201ENST00000262650 ATL2Q8NHH9 583 aa7.09□□□□□ -1.28
ITCH-201ENST00000262650 RBM46Q8TBY0 533 aaKnown RBP7.09□□□□□ -1.28
ITCH-201ENST00000262650 UBXN4Q92575 508 aa7.09□□□□□ -1.28
ITCH-201ENST00000262650 MAP3K19Q56UN5 1328 aa7.09□□□□□ -1.28
ITCH-201ENST00000262650 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.28
ITCH-201ENST00000262650 RGS3P49796 1198 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 HSP90AB3PQ58FF7 597 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 ZKSCAN2Q63HK3 967 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
ITCH-201ENST00000262650 SPOCK3Q9BQ16 436 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 ARHGEF10LQ9HCE6 1279 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 U2SURPO15042 1029 aaKnown RBP7.08□□□□□ -1.28
ITCH-201ENST00000262650 MSH5O43196 834 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 ANKRD23Q86SG2 305 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 LRRC4BQ9NT99 713 aa7.08□□□□□ -1.28
ITCH-201ENST00000262650 FEZ2Q9UHY8 353 aaPredicted RBP7.08□□□□□ -1.28
ITCH-201ENST00000262650 NOP58Q9Y2X3 529 aaKnown RBP7.08□□□□□ -1.28
ITCH-201ENST00000262650 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
ITCH-201ENST00000262650 CSB-PGBD3P0DP91 1061 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 BDNFP23560 247 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 ADAMTS7Q9UKP4 1686 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 MTA1Q13330 715 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 ZNF827Q17R98 1081 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 PDGFDQ9GZP0 370 aaPredicted RBP7.07□□□□□ -1.28
ITCH-201ENST00000262650 BRCA1P38398 1863 aaKnown RBP7.07□□□□□ -1.28
ITCH-201ENST00000262650 PNPLA7Q6ZV29 1317 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 FYB1O15117 783 aa7.07□□□□□ -1.28
ITCH-201ENST00000262650 ZNF500O60304 480 aaPredicted RBP7.07□□□□□ -1.28
ITCH-201ENST00000262650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.07□□□□□ -1.281e-6■□□□□ 11.2
ITCH-201ENST00000262650 PPP1R1BQ9UD71 204 aaPredicted RBP7.07□□□□□ -1.28
ITCH-201ENST00000262650 USP47Q96K76 1375 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 ST20-MTHFSA0A0A6YYL1 179 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 COG3Q96JB2 828 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 CCDC85AQ96PX6 553 aaPredicted RBP7.06□□□□□ -1.28
ITCH-201ENST00000262650 SYT17Q9BSW7 474 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 NLRP2Q9NX02 1062 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 FRMD4BQ9Y2L6 1034 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 FLT4P35916 1363 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 EIF3JO75822 258 aaKnown RBP7.06□□□□□ -1.28
ITCH-201ENST00000262650 GYS2P54840 703 aa7.06□□□□□ -1.28
ITCH-201ENST00000262650 GNL3LQ9NVN8 582 aaKnown RBP7.06□□□□□ -1.28
ITCH-201ENST00000262650 ZRANB2O95218 330 aaKnown RBP eCLIP7.05□□□□□ -1.28
ITCH-201ENST00000262650 YY1P25490 414 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 PPP4CP60510 307 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 C4orf46Q504U0 113 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 CCDC184Q52MB2 194 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
ITCH-201ENST00000262650 CREBRFQ8IUR6 639 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 SCN11AQ9UI33 1791 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 SPDYE4A6NLX3 237 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 ZCRB1Q8TBF4 217 aaKnown RBP7.05□□□□□ -1.28
ITCH-201ENST00000262650 JADE2Q9NQC1 790 aa7.05□□□□□ -1.28
ITCH-201ENST00000262650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.05□□□□□ -1.286e-8■■■□□ 15.3
ITCH-201ENST00000262650 TMF1P82094 1093 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 PLSCR2Q9NRY7 297 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 COMMD10Q9Y6G5 202 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 SRCAPQ6ZRS2 3230 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 ARFGEF1Q9Y6D6 1849 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms