RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 AFDNP55196 1824 aaKnown RBP24.17■■□□□ 1.46
UPK3B-201ENST00000257632 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
UPK3B-201ENST00000257632 PDIA6Q15084 440 aa24.17■■□□□ 1.46
UPK3B-201ENST00000257632 TTLL7Q6ZT98 887 aa24.17■■□□□ 1.46
UPK3B-201ENST00000257632 DDX21Q9NR30 783 aaKnown RBP eCLIP24.17■■□□□ 1.46
UPK3B-201ENST00000257632 CARMIL3Q8ND23 1372 aa24.16■■□□□ 1.46
UPK3B-201ENST00000257632 MAP3K15Q6ZN16 1313 aa24.16■■□□□ 1.46
UPK3B-201ENST00000257632 PROSER3Q2NL68 480 aa24.16■■□□□ 1.46
UPK3B-201ENST00000257632 C8orf58Q8NAV2 365 aa24.16■■□□□ 1.46
UPK3B-201ENST00000257632 CHPF2Q9P2E5 772 aa24.16■■□□□ 1.46
UPK3B-201ENST00000257632 RGL2O15211 777 aa24.15■■□□□ 1.46
UPK3B-201ENST00000257632 NPHP1O15259 732 aa24.15■■□□□ 1.46
UPK3B-201ENST00000257632 ZBTB3Q9H5J0 574 aa24.15■■□□□ 1.46
UPK3B-201ENST00000257632 DBF4Q9UBU7 674 aaPredicted RBP24.15■■□□□ 1.46
UPK3B-201ENST00000257632 ERVV-1B6SEH8 477 aa24.14■■□□□ 1.45
UPK3B-201ENST00000257632 TGFB2P61812 414 aa24.14■■□□□ 1.45
UPK3B-201ENST00000257632 AIMP1Q12904 312 aaKnown RBP24.14■■□□□ 1.45
UPK3B-201ENST00000257632 HLFQ16534 295 aa24.14■■□□□ 1.45
UPK3B-201ENST00000257632 CHMP4AQ9BY43 222 aa24.14■■□□□ 1.45
UPK3B-201ENST00000257632 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
UPK3B-201ENST00000257632 NRXN2Q9P2S2 1712 aa24.13■■□□□ 1.45
UPK3B-201ENST00000257632 NIP7Q9Y221 180 aaKnown RBP eCLIP24.13■■□□□ 1.45
UPK3B-201ENST00000257632 NUP98P52948 1817 aa24.12■■□□□ 1.45
UPK3B-201ENST00000257632 COPS6Q7L5N1 327 aa24.12■■□□□ 1.45
UPK3B-201ENST00000257632 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
UPK3B-201ENST00000257632 XAGE3Q8WTP9 111 aa24.12■■□□□ 1.45
UPK3B-201ENST00000257632 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
UPK3B-201ENST00000257632 N4BP2Q86UW6 1770 aaPredicted RBP24.11■■□□□ 1.45
UPK3B-201ENST00000257632 GOLGA2Q08379 1002 aa24.11■■□□□ 1.45
UPK3B-201ENST00000257632 TSPYL6Q8N831 410 aa24.11■■□□□ 1.45
UPK3B-201ENST00000257632 HYPKQ9NX55 129 aa24.11■■□□□ 1.45
UPK3B-201ENST00000257632 PXDNLA1KZ92 1463 aa24.11■■□□□ 1.45
UPK3B-201ENST00000257632 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
UPK3B-201ENST00000257632 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
UPK3B-201ENST00000257632 CNBD1Q8NA66 436 aa24.1■■□□□ 1.45
UPK3B-201ENST00000257632 WWC3Q9ULE0 1092 aa24.1■■□□□ 1.45
UPK3B-201ENST00000257632 A0A0G2JLW4 131 aa24.09■■□□□ 1.45
UPK3B-201ENST00000257632 NBPF5PQ86XG9 351 aaPredicted RBP24.09■■□□□ 1.45
UPK3B-201ENST00000257632 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
UPK3B-201ENST00000257632 FAM177BA6PVY3 158 aa24.08■■□□□ 1.45
UPK3B-201ENST00000257632 DPEP1P16444 411 aa24.08■■□□□ 1.45
UPK3B-201ENST00000257632 ST5P78524 1137 aa24.08■■□□□ 1.45
UPK3B-201ENST00000257632 PRR5LQ6MZQ0 368 aa24.08■■□□□ 1.45
UPK3B-201ENST00000257632 GIGYF2Q6Y7W6 1299 aaKnown RBP24.08■■□□□ 1.45
UPK3B-201ENST00000257632 SPINK5Q9NQ38 1064 aaPredicted RBP24.08■■□□□ 1.45
UPK3B-201ENST00000257632 ZNF521Q96K83 1311 aa24.08■■□□□ 1.44
UPK3B-201ENST00000257632 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
UPK3B-201ENST00000257632 GPTP24298 496 aa24.06■■□□□ 1.44
UPK3B-201ENST00000257632 EXOSC9Q06265 439 aaKnown RBP24.06■■□□□ 1.44
UPK3B-201ENST00000257632 CCDC24Q8N4L8 307 aa24.06■■□□□ 1.44
UPK3B-201ENST00000257632 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
UPK3B-201ENST00000257632 GTF2E1P29083 439 aaPredicted RBP24.05■■□□□ 1.44
UPK3B-201ENST00000257632 HSP90AB3PQ58FF7 597 aa24.05■■□□□ 1.44
UPK3B-201ENST00000257632 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
UPK3B-201ENST00000257632 YBX3P16989 372 aaKnown RBP eCLIP24.04■■□□□ 1.44
UPK3B-201ENST00000257632 CHRNA5P30532 468 aa24.04■■□□□ 1.44
UPK3B-201ENST00000257632 GOLGB1Q14789 3259 aaKnown RBP24.03■■□□□ 1.44
UPK3B-201ENST00000257632 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
UPK3B-201ENST00000257632 GRIN3BO60391 1043 aa24.03■■□□□ 1.44
UPK3B-201ENST00000257632 ANKRD13DQ6ZTN6 518 aa24.03■■□□□ 1.44
UPK3B-201ENST00000257632 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
UPK3B-201ENST00000257632 BRIP1Q9BX63 1249 aa24.03■■□□□ 1.44
UPK3B-201ENST00000257632 NYXQ9GZU5 481 aa24.03■■□□□ 1.44
UPK3B-201ENST00000257632 ANKRD36CQ5JPF3 1778 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 PDE6BP35913 854 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 C2CD5Q86YS7 1000 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 ZNF34Q8IZ26 560 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 PHAXQ9H814 394 aaKnown RBP24.02■■□□□ 1.44
UPK3B-201ENST00000257632 PIM2Q9P1W9 311 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 BCS1LQ9Y276 419 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 ANKRD31Q8N7Z5 1873 aa24.02■■□□□ 1.44
UPK3B-201ENST00000257632 E9PSI1 815 aa24.01■■□□□ 1.43
UPK3B-201ENST00000257632 H0YIN7 160 aa24.01■■□□□ 1.43
UPK3B-201ENST00000257632 PARP10Q53GL7 1025 aa24.01■■□□□ 1.43
UPK3B-201ENST00000257632 UBN2Q6ZU65 1347 aa24.01■■□□□ 1.43
UPK3B-201ENST00000257632 BRCA1P38398 1863 aaKnown RBP24■■□□□ 1.43
UPK3B-201ENST00000257632 C1QTNF8P60827 252 aa24■■□□□ 1.43
UPK3B-201ENST00000257632 PPP1R42Q7Z4L9 355 aa24■■□□□ 1.43
UPK3B-201ENST00000257632 RIC3Q7Z5B4 369 aa24■■□□□ 1.43
UPK3B-201ENST00000257632 PDZRN3Q9UPQ7 1066 aa24■■□□□ 1.43
UPK3B-201ENST00000257632 VAMP4O75379 141 aa23.99■■□□□ 1.43
UPK3B-201ENST00000257632 DDX58O95786 925 aaKnown RBP23.99■■□□□ 1.43
UPK3B-201ENST00000257632 KCNA3P22001 575 aa23.99■■□□□ 1.43
UPK3B-201ENST00000257632 TCIRG1Q13488 830 aa23.99■■□□□ 1.43
UPK3B-201ENST00000257632 SUSD4Q5VX71 490 aa23.99■■□□□ 1.43
UPK3B-201ENST00000257632 DALRD3Q5D0E6 543 aaKnown RBP23.98■■□□□ 1.43
UPK3B-201ENST00000257632 IBTKQ9P2D0 1353 aaPredicted RBP23.98■■□□□ 1.43
UPK3B-201ENST00000257632 DLEC1Q9Y238 1755 aa23.98■■□□□ 1.43
UPK3B-201ENST00000257632 ARFGEF2Q9Y6D5 1785 aa23.98■■□□□ 1.43
UPK3B-201ENST00000257632 SLC4A2P04920 1241 aa23.97■■□□□ 1.43
UPK3B-201ENST00000257632 NUTM1Q86Y26 1132 aa23.97■■□□□ 1.43
UPK3B-201ENST00000257632 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
UPK3B-201ENST00000257632 ZNF622Q969S3 477 aaKnown RBP eCLIP23.96■■□□□ 1.43
UPK3B-201ENST00000257632 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
UPK3B-201ENST00000257632 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
UPK3B-201ENST00000257632 ERFEQ4G0M1 354 aa23.95■■□□□ 1.42
UPK3B-201ENST00000257632 NLRP10Q86W26 655 aa23.95■■□□□ 1.42
UPK3B-201ENST00000257632 COL11A2P13942 1736 aaPredicted RBP23.95■■□□□ 1.42
UPK3B-201ENST00000257632 NTSR2O95665 410 aa23.94■■□□□ 1.42
UPK3B-201ENST00000257632 HNRNPUQ00839 825 aaKnown RBP eCLIP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms