RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
VPREB3-201ENST00000248948 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
VPREB3-201ENST00000248948 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
VPREB3-201ENST00000248948 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
VPREB3-201ENST00000248948 TNRC6CQ9HCJ0 1690 aaKnown RBP16.61■□□□□ 0.25
VPREB3-201ENST00000248948 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
VPREB3-201ENST00000248948 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
VPREB3-201ENST00000248948 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
VPREB3-201ENST00000248948 WWC1Q8IX03 1113 aa16.6■□□□□ 0.25
VPREB3-201ENST00000248948 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
VPREB3-201ENST00000248948 LAMB2P55268 1798 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 MYL6BP14649 208 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 PDIA6Q15084 440 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
VPREB3-201ENST00000248948 DPEP1P16444 411 aa16.58■□□□□ 0.24
VPREB3-201ENST00000248948 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
VPREB3-201ENST00000248948 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
VPREB3-201ENST00000248948 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
VPREB3-201ENST00000248948 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPREB3-201ENST00000248948 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
VPREB3-201ENST00000248948 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
VPREB3-201ENST00000248948 YY1P25490 414 aa16.57■□□□□ 0.24
VPREB3-201ENST00000248948 ST5P78524 1137 aa16.57■□□□□ 0.24
VPREB3-201ENST00000248948 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
VPREB3-201ENST00000248948 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
VPREB3-201ENST00000248948 CCER2I3L3R5 266 aa16.56■□□□□ 0.24
VPREB3-201ENST00000248948 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
VPREB3-201ENST00000248948 BRIP1Q9BX63 1249 aa16.56■□□□□ 0.24
VPREB3-201ENST00000248948 CHMP4AQ9BY43 222 aa16.56■□□□□ 0.24
VPREB3-201ENST00000248948 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
VPREB3-201ENST00000248948 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPREB3-201ENST00000248948 SBF1O95248 1867 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 KCNA3P22001 575 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 HLFQ16534 295 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
VPREB3-201ENST00000248948 NBPF5PQ86XG9 351 aaPredicted RBP16.55■□□□□ 0.24
VPREB3-201ENST00000248948 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
VPREB3-201ENST00000248948 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
VPREB3-201ENST00000248948 NPHP1O15259 732 aa16.54■□□□□ 0.24
VPREB3-201ENST00000248948 PDE6BP35913 854 aa16.54■□□□□ 0.24
VPREB3-201ENST00000248948 WDR63Q8IWG1 891 aa16.54■□□□□ 0.24
VPREB3-201ENST00000248948 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
VPREB3-201ENST00000248948 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
VPREB3-201ENST00000248948 ADCY9O60503 1353 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 CHRNA5P30532 468 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 DALRD3Q5D0E6 543 aaKnown RBP16.53■□□□□ 0.24
VPREB3-201ENST00000248948 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
VPREB3-201ENST00000248948 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 H0YIN7 160 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 ANXA1P04083 346 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
VPREB3-201ENST00000248948 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
VPREB3-201ENST00000248948 SLX4Q8IY92 1834 aa16.52■□□□□ 0.23
VPREB3-201ENST00000248948 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
VPREB3-201ENST00000248948 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
VPREB3-201ENST00000248948 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
VPREB3-201ENST00000248948 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
VPREB3-201ENST00000248948 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
VPREB3-201ENST00000248948 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
VPREB3-201ENST00000248948 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
VPREB3-201ENST00000248948 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
VPREB3-201ENST00000248948 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
VPREB3-201ENST00000248948 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
VPREB3-201ENST00000248948 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
VPREB3-201ENST00000248948 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
VPREB3-201ENST00000248948 NTSR2O95665 410 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 SRGNP10124 158 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 GPTP24298 496 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
VPREB3-201ENST00000248948 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 TTLL6Q8N841 843 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
VPREB3-201ENST00000248948 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
VPREB3-201ENST00000248948 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
VPREB3-201ENST00000248948 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
VPREB3-201ENST00000248948 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
VPREB3-201ENST00000248948 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
VPREB3-201ENST00000248948 MYH3P11055 1940 aa16.47■□□□□ 0.23
VPREB3-201ENST00000248948 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
VPREB3-201ENST00000248948 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
VPREB3-201ENST00000248948 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
VPREB3-201ENST00000248948 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
VPREB3-201ENST00000248948 MASTLQ96GX5 879 aa16.46■□□□□ 0.23
VPREB3-201ENST00000248948 SALL2Q9Y467 1007 aaPredicted RBP16.46■□□□□ 0.23
VPREB3-201ENST00000248948 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
VPREB3-201ENST00000248948 NPR1P16066 1061 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms