RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 YY1P25490 414 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 DDR1Q08345 913 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 THUMPD2Q9BTF0 503 aaKnown RBP13.44□□□□□ -0.26
CDCA3-201ENST00000229265 BCL2L13Q9BXK5 485 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
CDCA3-201ENST00000229265 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
CDCA3-201ENST00000229265 ABCC4O15439 1325 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-201ENST00000229265 SSFA2P28290 1259 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-201ENST00000229265 FAM161AQ3B820 660 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 MCM10Q7L590 875 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
CDCA3-201ENST00000229265 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
CDCA3-201ENST00000229265 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 MMP10P09238 476 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 ITPRIPQ8IWB1 547 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-201ENST00000229265 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
CDCA3-201ENST00000229265 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
CDCA3-201ENST00000229265 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
CDCA3-201ENST00000229265 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-201ENST00000229265 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
CDCA3-201ENST00000229265 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
CDCA3-201ENST00000229265 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
CDCA3-201ENST00000229265 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 KCNA3P22001 575 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 POLD1P28340 1107 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-201ENST00000229265 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 NRXN2Q9P2S2 1712 aa13.39□□□□□ -0.27
CDCA3-201ENST00000229265 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
CDCA3-201ENST00000229265 KDM3BQ7LBC6 1761 aa13.38□□□□□ -0.27
CDCA3-201ENST00000229265 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
CDCA3-201ENST00000229265 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
CDCA3-201ENST00000229265 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
CDCA3-201ENST00000229265 A0A0G2JLW4 131 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-201ENST00000229265 A1BGP04217 495 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 TNNQ9UQP3 1299 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 SCN7AQ01118 1682 aa13.37□□□□□ -0.27
CDCA3-201ENST00000229265 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-201ENST00000229265 TM4SF1P30408 202 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 GPR162Q16538 588 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
CDCA3-201ENST00000229265 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
CDCA3-201ENST00000229265 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 HEG1Q9ULI3 1381 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
CDCA3-201ENST00000229265 DPEP1P16444 411 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 TEFQ10587 303 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 CD2APQ9Y5K6 639 aa13.35□□□□□ -0.27
CDCA3-201ENST00000229265 COL15A1P39059 1388 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 CHRNA5P30532 468 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 PRELPP51888 382 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 NUCB1Q02818 461 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
CDCA3-201ENST00000229265 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
CDCA3-201ENST00000229265 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
CDCA3-201ENST00000229265 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
CDCA3-201ENST00000229265 NFIXQ14938 502 aa13.33□□□□□ -0.28
CDCA3-201ENST00000229265 GNAI3P08754 354 aa13.32□□□□□ -0.28
CDCA3-201ENST00000229265 RFC4P35249 363 aa13.32□□□□□ -0.28
CDCA3-201ENST00000229265 C8orf34Q49A92 452 aa13.32□□□□□ -0.28
CDCA3-201ENST00000229265 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
CDCA3-201ENST00000229265 ADCY9O60503 1353 aa13.32□□□□□ -0.28
CDCA3-201ENST00000229265 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-201ENST00000229265 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 HMMRO75330 724 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
CDCA3-201ENST00000229265 ADRA2BP18089 450 aa13.3□□□□□ -0.28
CDCA3-201ENST00000229265 RGS3P49796 1198 aa13.3□□□□□ -0.28
CDCA3-201ENST00000229265 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
CDCA3-201ENST00000229265 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-201ENST00000229265 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms