RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
CACTIN-201ENST00000221899 JAKMIP1Q96N16 626 aaKnown RBP22.23■■□□□ 1.15
CACTIN-201ENST00000221899 TTC12Q9H892 705 aaPredicted RBP22.23■■□□□ 1.15
CACTIN-201ENST00000221899 GJB2P29033 226 aa22.22■■□□□ 1.15
CACTIN-201ENST00000221899 UBE2HP62256 183 aa22.22■■□□□ 1.15
CACTIN-201ENST00000221899 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
CACTIN-201ENST00000221899 FAM184AQ8NB25 1140 aa22.22■■□□□ 1.15
CACTIN-201ENST00000221899 DNM1Q05193 864 aaKnown RBP22.21■■□□□ 1.15
CACTIN-201ENST00000221899 PA2G4Q9UQ80 394 aaKnown RBP22.21■■□□□ 1.15
CACTIN-201ENST00000221899 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
CACTIN-201ENST00000221899 HYPKQ9NX55 129 aa22.21■■□□□ 1.15
CACTIN-201ENST00000221899 N4BP2Q86UW6 1770 aaPredicted RBP22.21■■□□□ 1.15
CACTIN-201ENST00000221899 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
CACTIN-201ENST00000221899 PDRG1Q9NUG6 133 aa22.2■■□□□ 1.14
CACTIN-201ENST00000221899 GLRX3O76003 335 aaKnown RBP22.2■■□□□ 1.14
CACTIN-201ENST00000221899 UVSSAQ2YD98 709 aa22.2■■□□□ 1.14
CACTIN-201ENST00000221899 VPS37CA5D8V6 355 aaPredicted RBP22.19■■□□□ 1.14
CACTIN-201ENST00000221899 CLASRPQ8N2M8 674 aaKnown RBP22.19■■□□□ 1.14
CACTIN-201ENST00000221899 NECAB1Q8N987 351 aa22.19■■□□□ 1.14
CACTIN-201ENST00000221899 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
CACTIN-201ENST00000221899 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
CACTIN-201ENST00000221899 DYNC1I1O14576 645 aa22.18■■□□□ 1.14
CACTIN-201ENST00000221899 HSP90AB4PQ58FF6 505 aa22.18■■□□□ 1.14
CACTIN-201ENST00000221899 ADCY9O60503 1353 aa22.18■■□□□ 1.14
CACTIN-201ENST00000221899 SETD1BQ9UPS6 1966 aaKnown RBP22.17■■□□□ 1.14
CACTIN-201ENST00000221899 PKNOX2Q96KN3 472 aa22.17■■□□□ 1.14
CACTIN-201ENST00000221899 MTMR6Q9Y217 621 aa22.17■■□□□ 1.14
CACTIN-201ENST00000221899 ATP6V1DQ9Y5K8 247 aa22.17■■□□□ 1.14
CACTIN-201ENST00000221899 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 C9orf78Q9NZ63 289 aaPredicted RBP22.16■■□□□ 1.14
CACTIN-201ENST00000221899 CHMP3Q9Y3E7 222 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 TBX22Q9Y458 520 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 TTC41PQ6P2S7 1318 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 ST3GAL1Q11201 340 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 COL9A3Q14050 684 aaPredicted RBP22.16■■□□□ 1.14
CACTIN-201ENST00000221899 RUFY2Q8WXA3 655 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 LETM1O95202 739 aaPredicted RBP22.16■■□□□ 1.14
CACTIN-201ENST00000221899 IFIT2P09913 472 aaKnown RBP22.16■■□□□ 1.14
CACTIN-201ENST00000221899 TSC1Q92574 1164 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 CYP46A1Q9Y6A2 500 aa22.16■■□□□ 1.14
CACTIN-201ENST00000221899 TEFQ10587 303 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 ME3Q16798 604 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 CWF19L2Q2TBE0 894 aaKnown RBP22.15■■□□□ 1.14
CACTIN-201ENST00000221899 MAP3K2Q9Y2U5 619 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 KCNA6P17658 529 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 KCNJ4P48050 445 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 NOLC1Q14978 699 aaKnown RBP eCLIP22.15■■□□□ 1.14
CACTIN-201ENST00000221899 AACSQ86V21 672 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 PIBF1Q8WXW3 757 aa22.15■■□□□ 1.14
CACTIN-201ENST00000221899 KDM4AO75164 1064 aa22.14■■□□□ 1.14
CACTIN-201ENST00000221899 PROSER3Q2NL68 480 aa22.14■■□□□ 1.14
CACTIN-201ENST00000221899 VPS53Q5VIR6 699 aa22.14■■□□□ 1.14
CACTIN-201ENST00000221899 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.13
CACTIN-201ENST00000221899 AP5Z1O43299 807 aa22.14■■□□□ 1.13
CACTIN-201ENST00000221899 FERMT3Q86UX7 667 aa22.14■■□□□ 1.13
CACTIN-201ENST00000221899 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.13
CACTIN-201ENST00000221899 FAM227BQ96M60 508 aa22.14■■□□□ 1.13
CACTIN-201ENST00000221899 TCEANC2Q96MN5 208 aa22.14■■□□□ 1.13
CACTIN-201ENST00000221899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.14■■□□□ 1.13
CACTIN-201ENST00000221899 MARF1Q9Y4F3 1742 aaKnown RBP22.13■■□□□ 1.13
CACTIN-201ENST00000221899 FAM173BQ6P4H8 233 aa22.13■■□□□ 1.13
CACTIN-201ENST00000221899 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
CACTIN-201ENST00000221899 MAP7D2Q96T17 732 aa22.13■■□□□ 1.13
CACTIN-201ENST00000221899 ZSWIM6Q9HCJ5 1215 aa22.13■■□□□ 1.13
CACTIN-201ENST00000221899 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
CACTIN-201ENST00000221899 FUCA2Q9BTY2 467 aa22.12■■□□□ 1.13
CACTIN-201ENST00000221899 RBM8AQ9Y5S9 174 aaKnown RBP22.12■■□□□ 1.13
CACTIN-201ENST00000221899 PRAMEF22A3QJZ6 481 aa22.12■■□□□ 1.13
CACTIN-201ENST00000221899 TPCN1Q9ULQ1 816 aa22.12■■□□□ 1.13
CACTIN-201ENST00000221899 GPATCH3Q96I76 525 aa22.11■■□□□ 1.13
CACTIN-201ENST00000221899 CCDC171Q6TFL3 1326 aa22.11■■□□□ 1.13
CACTIN-201ENST00000221899 SPC24Q8NBT2 197 aa22.11■■□□□ 1.13
CACTIN-201ENST00000221899 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
CACTIN-201ENST00000221899 ZKSCAN1P17029 563 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 NECTIN1Q15223 517 aa22.1■■□□□ 1.13
CACTIN-201ENST00000221899 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
CACTIN-201ENST00000221899 CREB3L3Q68CJ9 461 aa22.1■■□□□ 1.13
CACTIN-201ENST00000221899 ZSCAN31Q96LW9 406 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 SH2B1Q9NRF2 756 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 NMIQ13287 307 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 LARP1BQ659C4 914 aaKnown RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 IP6K1Q92551 441 aa22.1■■□□□ 1.13
CACTIN-201ENST00000221899 EVI5LQ96CN4 794 aa22.1■■□□□ 1.13
CACTIN-201ENST00000221899 DBF4Q9UBU7 674 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-201ENST00000221899 HOXB7P09629 217 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 CAMK4Q16566 473 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 CDC37L1Q7L3B6 337 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 MYRIPQ8NFW9 859 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 MTX1Q13505 466 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 SIL1Q9H173 461 aa22.09■■□□□ 1.13
CACTIN-201ENST00000221899 TLR7Q9NYK1 1049 aaKnown RBP22.09■■□□□ 1.13
CACTIN-201ENST00000221899 CRYBG1Q9Y4K1 1723 aa22.08■■□□□ 1.13
CACTIN-201ENST00000221899 AIMP1Q12904 312 aaKnown RBP22.08■■□□□ 1.12
CACTIN-201ENST00000221899 TTC6Q86TZ1 520 aa22.08■■□□□ 1.12
CACTIN-201ENST00000221899 EAF2Q96CJ1 260 aaPredicted RBP22.07■■□□□ 1.12
CACTIN-201ENST00000221899 TM6SF1Q9BZW5 370 aa22.07■■□□□ 1.12
CACTIN-201ENST00000221899 TAF6LQ9Y6J9 622 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms