RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
CDKL1-201ENST00000216378 CCDC87Q9NVE4 849 aa14.31□□□□□ -0.12
CDKL1-201ENST00000216378 NOB1Q9ULX3 412 aaKnown RBP14.31□□□□□ -0.12
CDKL1-201ENST00000216378 UBR3Q6ZT12 1888 aa14.31□□□□□ -0.12
CDKL1-201ENST00000216378 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
CDKL1-201ENST00000216378 TBC1D2BQ9UPU7 963 aa14.3□□□□□ -0.12
CDKL1-201ENST00000216378 IL16Q14005 1332 aa14.3□□□□□ -0.12
CDKL1-201ENST00000216378 RRP9O43818 475 aaKnown RBP14.3□□□□□ -0.12
CDKL1-201ENST00000216378 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
CDKL1-201ENST00000216378 STK32BQ9NY57 414 aa14.3□□□□□ -0.12
CDKL1-201ENST00000216378 RGS3P49796 1198 aa14.29□□□□□ -0.12
CDKL1-201ENST00000216378 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
CDKL1-201ENST00000216378 SOS1Q07889 1333 aaPredicted RBP14.29□□□□□ -0.12
CDKL1-201ENST00000216378 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
CDKL1-201ENST00000216378 VAMP4O75379 141 aa14.29□□□□□ -0.12
CDKL1-201ENST00000216378 TWISTNBQ3B726 338 aaPredicted RBP14.29□□□□□ -0.12
CDKL1-201ENST00000216378 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
CDKL1-201ENST00000216378 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
CDKL1-201ENST00000216378 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
CDKL1-201ENST00000216378 G2E3Q7L622 706 aa14.28□□□□□ -0.12
CDKL1-201ENST00000216378 BABAM1Q9NWV8 329 aa14.28□□□□□ -0.12
CDKL1-201ENST00000216378 ZNF831Q5JPB2 1677 aa14.28□□□□□ -0.12
CDKL1-201ENST00000216378 RPS6KA4O75676 772 aa14.27□□□□□ -0.12
CDKL1-201ENST00000216378 STARD3NLO95772 234 aa14.27□□□□□ -0.12
CDKL1-201ENST00000216378 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.12
CDKL1-201ENST00000216378 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.12
CDKL1-201ENST00000216378 TRIM27P14373 513 aa14.27□□□□□ -0.13
CDKL1-201ENST00000216378 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
CDKL1-201ENST00000216378 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
CDKL1-201ENST00000216378 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
CDKL1-201ENST00000216378 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.13
CDKL1-201ENST00000216378 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.13
CDKL1-201ENST00000216378 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
CDKL1-201ENST00000216378 HLFQ16534 295 aa14.26□□□□□ -0.13
CDKL1-201ENST00000216378 RC3H1Q5TC82 1133 aaKnown RBP14.26□□□□□ -0.13
CDKL1-201ENST00000216378 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
CDKL1-201ENST00000216378 COL15A1P39059 1388 aa14.26□□□□□ -0.13
CDKL1-201ENST00000216378 C4AP0C0L4 1744 aa14.25□□□□□ -0.13
CDKL1-201ENST00000216378 USPL1Q5W0Q7 1092 aa14.25□□□□□ -0.13
CDKL1-201ENST00000216378 ZKSCAN2Q63HK3 967 aa14.25□□□□□ -0.13
CDKL1-201ENST00000216378 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
CDKL1-201ENST00000216378 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
CDKL1-201ENST00000216378 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
CDKL1-201ENST00000216378 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
CDKL1-201ENST00000216378 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
CDKL1-201ENST00000216378 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
CDKL1-201ENST00000216378 ZBTB3Q9H5J0 574 aa14.24□□□□□ -0.13
CDKL1-201ENST00000216378 LAMB4A4D0S4 1761 aa14.24□□□□□ -0.13
CDKL1-201ENST00000216378 GYS1P13807 737 aa14.23□□□□□ -0.13
CDKL1-201ENST00000216378 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
CDKL1-201ENST00000216378 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
CDKL1-201ENST00000216378 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
CDKL1-201ENST00000216378 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
CDKL1-201ENST00000216378 SSFA2P28290 1259 aa14.23□□□□□ -0.13
CDKL1-201ENST00000216378 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
CDKL1-201ENST00000216378 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
CDKL1-201ENST00000216378 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
CDKL1-201ENST00000216378 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
CDKL1-201ENST00000216378 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
CDKL1-201ENST00000216378 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
CDKL1-201ENST00000216378 RFC4P35249 363 aa14.22□□□□□ -0.13
CDKL1-201ENST00000216378 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
CDKL1-201ENST00000216378 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
CDKL1-201ENST00000216378 IPO9Q96P70 1041 aaKnown RBP14.22□□□□□ -0.13
CDKL1-201ENST00000216378 PTGER2P43116 358 aa14.21□□□□□ -0.13
CDKL1-201ENST00000216378 ATF7IPQ6VMQ6 1270 aa14.21□□□□□ -0.13
CDKL1-201ENST00000216378 C1orf115Q9H7X2 142 aa14.21□□□□□ -0.13
CDKL1-201ENST00000216378 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDKL1-201ENST00000216378 MVPQ14764 893 aaKnown RBP14.21□□□□□ -0.14
CDKL1-201ENST00000216378 CENPQQ7L2Z9 268 aaPredicted RBP14.21□□□□□ -0.14
CDKL1-201ENST00000216378 DDR1Q08345 913 aa14.2□□□□□ -0.14
CDKL1-201ENST00000216378 TBC1D9BQ66K14 1250 aa14.2□□□□□ -0.14
CDKL1-201ENST00000216378 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
CDKL1-201ENST00000216378 PDE4AP27815 886 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
CDKL1-201ENST00000216378 NARFQ9UHQ1 456 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 F6X3S4 739 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 HOXB7P09629 217 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
CDKL1-201ENST00000216378 PRDM4Q9UKN5 801 aa14.19□□□□□ -0.14
CDKL1-201ENST00000216378 GPTP24298 496 aa14.18□□□□□ -0.14
CDKL1-201ENST00000216378 SYNE4Q8N205 404 aa14.18□□□□□ -0.14
CDKL1-201ENST00000216378 NFIXQ14938 502 aa14.18□□□□□ -0.14
CDKL1-201ENST00000216378 MMP10P09238 476 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 CCDC30Q5VVM6 783 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
CDKL1-201ENST00000216378 WWC3Q9ULE0 1092 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 ATP5J2-PTCD1G3V325 749 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 ZPR1O75312 459 aa14.17□□□□□ -0.14
CDKL1-201ENST00000216378 ADCY9O60503 1353 aa14.16□□□□□ -0.14
CDKL1-201ENST00000216378 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
CDKL1-201ENST00000216378 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 ADRA2BP18089 450 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 FLIIQ13045 1269 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
CDKL1-201ENST00000216378 TM4SF1P30408 202 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms