RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 CENPHQ9H3R5 247 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 CLIP2Q9UDT6 1046 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 MKNK2Q9HBH9 465 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 RMND1Q9NWS8 449 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 KLHL40Q2TBA0 621 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 RBM5P52756 815 aaKnown RBP eCLIP14.51□□□□□ -0.09
LMCD1-201ENST00000157600 PLVAPQ9BX97 442 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 TCP11L1Q9NUJ3 509 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
LMCD1-201ENST00000157600 CALCOCO1Q9P1Z2 691 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 TRIM27P14373 513 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 PDE4BQ07343 736 aa14.51□□□□□ -0.09
LMCD1-201ENST00000157600 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 MPHOSPH10O00566 681 aaKnown RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 POLR3GO15318 223 aaPredicted RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 IL1RAPL2Q9NP60 686 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 STX6O43752 255 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 FLIIQ13045 1269 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 BBXQ8WY36 941 aaPredicted RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 CCDC194A0A1B0GVG4 234 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 ANKRD18BA2A2Z9 1011 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 USP5P45974 858 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 CDC5LQ99459 802 aaKnown RBP14.5□□□□□ -0.09
LMCD1-201ENST00000157600 CCDC171Q6TFL3 1326 aa14.5□□□□□ -0.09
LMCD1-201ENST00000157600 DYNC1I1O14576 645 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 PRPF40BQ6NWY9 871 aaKnown RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 CNNM3Q8NE01 707 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 SEPT11Q9NVA2 429 aaKnown RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 RBM27Q9P2N5 1060 aaKnown RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 BAG3O95817 575 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 FMNL3Q8IVF7 1028 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 MAP4K4O95819 1239 aaPredicted RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 TBC1D32Q96NH3 1257 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
LMCD1-201ENST00000157600 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
LMCD1-201ENST00000157600 USP37Q86T82 979 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 ZSCAN29Q8IWY8 852 aaPredicted RBP14.48□□□□□ -0.09
LMCD1-201ENST00000157600 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 TAX1BP1Q86VP1 789 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 FAM177A1Q8N128 213 aaPredicted RBP14.48□□□□□ -0.09
LMCD1-201ENST00000157600 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
LMCD1-201ENST00000157600 LDHCP07864 332 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 FERMT1Q9BQL6 677 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 CNNM2Q9H8M5 875 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 KCNG4Q8TDN1 519 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 ABCF2Q9UG63 623 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
LMCD1-201ENST00000157600 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 UHRF1BP1Q6BDS2 1440 aa14.48□□□□□ -0.09
LMCD1-201ENST00000157600 SMC1AQ14683 1233 aaKnown RBP14.48□□□□□ -0.09
LMCD1-201ENST00000157600 DYDC1Q8WWB3 177 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 STAMBPO95630 424 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 ZNF444Q8N0Y2 327 aaPredicted RBP14.47□□□□□ -0.09
LMCD1-201ENST00000157600 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 HS1BP3Q53T59 392 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 ANKRD62A6NC57 917 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
LMCD1-201ENST00000157600 CWC25Q9NXE8 425 aaPredicted RBP14.47□□□□□ -0.09
LMCD1-201ENST00000157600 MATR3P43243 847 aaKnown RBP eCLIP14.47□□□□□ -0.09
LMCD1-201ENST00000157600 HOOK3Q86VS8 718 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 PLXNC1O60486 1568 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 NOS1P29475 1434 aa14.47□□□□□ -0.09
LMCD1-201ENST00000157600 TUBBP07437 444 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 MPHOSPH6Q99547 160 aaKnown RBP14.46□□□□□ -0.09
LMCD1-201ENST00000157600 GSTO1P78417 241 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 TTC22Q5TAA0 569 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 SPAG1Q07617 926 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 C14orf93Q9H972 538 aaKnown RBP14.46□□□□□ -0.09
LMCD1-201ENST00000157600 KIF4BQ2VIQ3 1234 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 TNPO1Q92973 898 aaKnown RBP14.46□□□□□ -0.09
LMCD1-201ENST00000157600 NEBLO76041 1014 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 KRT23Q9C075 422 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 ANKIB1Q9P2G1 1089 aa14.46□□□□□ -0.09
LMCD1-201ENST00000157600 MAP2K1Q02750 393 aaPredicted RBP14.46□□□□□ -0.1
LMCD1-201ENST00000157600 MCM10Q7L590 875 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 NCOA7Q8NI08 942 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 SRRTQ9BXP5 876 aaKnown RBP14.46□□□□□ -0.1
LMCD1-201ENST00000157600 MAST1Q9Y2H9 1570 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 NUCB1Q02818 461 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 CKAP4Q07065 602 aaKnown RBP14.46□□□□□ -0.1
LMCD1-201ENST00000157600 TBC1D9Q6ZT07 1266 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 NUTM1Q86Y26 1132 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 KIAA0556O60303 1618 aa14.46□□□□□ -0.1
LMCD1-201ENST00000157600 PRPHP41219 470 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 CRACR2BQ8N4Y2 399 aaPredicted RBP14.45□□□□□ -0.1
LMCD1-201ENST00000157600 NBPF7P0C2Y1 421 aaPredicted RBP14.45□□□□□ -0.1
LMCD1-201ENST00000157600 TBC1D2Q9BYX2 928 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
LMCD1-201ENST00000157600 UQCRFS1P1P0C7P4 283 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 ATL3Q6DD88 541 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 PIK3C2GO75747 1445 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 CCDC102BQ68D86 513 aa14.45□□□□□ -0.1
LMCD1-201ENST00000157600 BOLA2Q9H3K6 86 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms