RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 PicalmQ7M6Y3 660 aaKnown RBP21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Cep120Q7TSG1 988 aa21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Ercc3P49135 783 aa21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Atp6v1aP50516 617 aaKnown RBP21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Capn12Q9ER56 720 aa21.4■■□□□ 1.02
Sort1-203ENSMUST00000135636 Eif6O55135 245 aa21.39■■□□□ 1.02
Sort1-203ENSMUST00000135636 Rad23bP54728 416 aa21.39■■□□□ 1.02
Sort1-203ENSMUST00000135636 Lmbr1lQ9D1E5 489 aa21.39■■□□□ 1.02
Sort1-203ENSMUST00000135636 Naip7Q9JIB3 1402 aa21.39■■□□□ 1.02
Sort1-203ENSMUST00000135636 Naip6Q9JIB6 1403 aa21.39■■□□□ 1.02
Sort1-203ENSMUST00000135636 Wdr70Q3TWF6 657 aa21.39■■□□□ 1.01
Sort1-203ENSMUST00000135636 Rbm17Q8JZX4 405 aaKnown RBP21.39■■□□□ 1.01
Sort1-203ENSMUST00000135636 Dbndd1Q9CZ00 160 aa21.39■■□□□ 1.01
Sort1-203ENSMUST00000135636 Plcd4Q8K3R3 807 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Pagr1bF6V0H0 108 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Prkag2Q91WG5 566 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Pagr1aQ99L02 253 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 1700018F24RikB2RW27 314 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Bms1Q6PGF5 1284 aaKnown RBP21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Cfap65Q3V0B4 1847 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 DlatQ8BMF4 642 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Abcc5Q9R1X5 1436 aa21.38■■□□□ 1.01
Sort1-203ENSMUST00000135636 Gjb2Q00977 226 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 1700010I14RikQ7TPG0 532 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 DymQ8CHY3 669 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Vps16Q920Q4 839 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Trap1aP19473 224 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Ttc12Q8BW49 704 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Pde1cQ64338 706 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 B4galnt4Q766D5 1034 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Rnf41Q8BH75 317 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Miga2Q8BK03 593 aa21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Mrps25Q9D125 171 aaKnown RBP21.37■■□□□ 1.01
Sort1-203ENSMUST00000135636 Smarcc2Q6PDG5 1213 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Abtb2Q7TQI7 1024 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 L1td1Q587J6 782 aaKnown RBP21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Cfap45Q9D9U9 551 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Slc4a2P13808 1237 aaKnown RBP21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Anp32eP97822 260 aaKnown RBP21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Fbxo2Q80UW2 297 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Dydc1Q9D9T0 175 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 PrxO55103 1391 aa21.36■■□□□ 1.01
Sort1-203ENSMUST00000135636 Zfp42P22227 288 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Cfap53Q9D439 514 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 EzrP26040 586 aaKnown RBP21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Nop53Q8BK35 484 aaKnown RBP21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Tshz3Q8CGV9 1081 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Cfap58B2RW38 873 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Trim25Q61510 634 aaKnown RBP21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Ankle2Q6P1H6 964 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Fchsd1Q6PFY1 688 aa21.35■■□□□ 1.01
Sort1-203ENSMUST00000135636 Bin1O08539 588 aaKnown RBP21.34■■□□□ 1.01
Sort1-203ENSMUST00000135636 Tmx1Q8VBT0 278 aa21.34■■□□□ 1.01
Sort1-203ENSMUST00000135636 Grm1P97772 1199 aa21.34■■□□□ 1.01
Sort1-203ENSMUST00000135636 Map3k12Q60700 888 aa21.34■■□□□ 1.01
Sort1-203ENSMUST00000135636 Ncapg2Q6DFV1 1138 aa21.34■■□□□ 1.01
Sort1-203ENSMUST00000135636 Arl1P61211 181 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 Tbc1d2bQ3U0J8 965 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 Elf1Q60775 612 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 Gbp4Q61107 620 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 Zkscan1Q8BGS3 561 aaKnown RBP21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 TxlnbQ8VBT1 685 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 AI481877A2ALV5 1481 aa21.33■■□□□ 1.01
Sort1-203ENSMUST00000135636 HellsQ60848 821 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Tacc1Q6Y685 774 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Lonrf3Q9D4H7 753 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Klhl10Q9D5V2 608 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 AW822073A0A0N4SUK1 652 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Palm3A2TJV2 734 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Akr1c19G3X9Y6 323 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Gm4758L7N258 96 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Vmn1r199Q8R280 367 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Metap2O08663 478 aaKnown RBP21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Slu7Q8BHJ9 585 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Cdcp1Q5U462 833 aa21.32■■□□□ 1
Sort1-203ENSMUST00000135636 Ppp1r9aH3BJD6 1292 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Ccdc102aQ3TMW1 549 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Tex19.1Q99MV2 351 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Tmem87bQ8BKU8 555 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Cetn2Q9R1K9 172 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Mug1P28665 1476 aa21.31■■□□□ 1
Sort1-203ENSMUST00000135636 Uba5Q8VE47 403 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Arap1Q4LDD4 1452 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Mroh7A2AVR2 1279 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Sap30bpQ02614 308 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Plekhm2Q80TQ5 1018 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Irs4Q9Z0Y7 1216 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Fam13bQ8K2H3 851 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Ctage5Q8R311 779 aa21.3■■□□□ 1
Sort1-203ENSMUST00000135636 Tubb6Q922F4 447 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Mroh2bQ7M6Y6 1581 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Kmt5bQ3U8K7 883 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 HelbQ6NVF4 1074 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Fam163aQ8CAA5 168 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Gapvd1Q6PAR5 1458 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 NinlQ6ZQ12 1394 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Sh3tc1G3X9F6 1346 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 CltaO08585 235 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Vti1aO89116 217 aa21.29■■□□□ 1
Sort1-203ENSMUST00000135636 Cdkn1cP49919 348 aa21.29■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms