RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Nlrp3Q8R4B8 1033 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Lmbr1lQ9D1E5 489 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Trip6Q9Z1Y4 480 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Fkbp5Q64378 456 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Ehd4Q9EQP2 541 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Kcnn1Q9EQR3 537 aa15.3■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Gnai2P08752 355 aaKnown RBP15.29■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Grm8P47743 908 aa15.29■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Map3k13Q1HKZ5 959 aa15.29■□□□□ 0.04
Ddx55-202ENSMUST00000111438 DaxxO35613 739 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Mum1Q6DID5 682 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 SowahdQ8BY98 327 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Spata31d1bE9QA57 1361 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Myh1Q5SX40 1942 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Snai1Q02085 264 aa15.28■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Triml2E9PW10 424 aa15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 NmiO35309 314 aa15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Strn4P58404 760 aa15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Atp1b3P97370 278 aa15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Ankib1Q6ZPS6 1085 aa15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 HmcesQ8R1M0 353 aaKnown RBP15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 RtcbQ99LF4 505 aaKnown RBP15.27■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Myd88P22366 296 aa15.27■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Adam1aQ60813 791 aa15.27■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Soga3Q6NZL0 945 aa15.27■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Slf2Q6P9P0 1278 aa15.27■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Cwc25Q9DBF7 416 aa15.27■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Fam198bQ3UPI1 517 aa15.26■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Tlr7P58681 1050 aa15.26■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Nsfl1cQ9CZ44 370 aaKnown RBP15.26■□□□□ 0.03
Ddx55-202ENSMUST00000111438 MeiocA2AG06 965 aa15.25■□□□□ 0.03
Ddx55-202ENSMUST00000111438 AU019823E9PUQ3 292 aa15.25■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Hs1bp3Q3TC93 395 aa15.25■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Stard3nlQ9DCI3 235 aa15.25■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Atp8b2P98199 1209 aa15.24■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Nlrp9bQ66X22 1003 aa15.24■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Fam13aQ8BGI4 693 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Duox1A2AQ92 1551 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 ScaperF8VQ70 1398 aaKnown RBP15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 ChgaP26339 463 aaKnown RBP15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Rtkn2Q14B46 604 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Trim27Q62158 513 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Srp68Q8BMA6 625 aaKnown RBP15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Amhr2Q8K592 568 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Fam213aQ9CYH2 218 aa15.23■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Ubn2Q80WC1 1314 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 InsrrQ9WTL4 1300 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Ier5O89113 308 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Cyp19a1P28649 503 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Ifit1bl2Q3U687 466 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Smc5Q8CG46 1101 aaKnown RBP15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 HnrnpuQ8VEK3 800 aaKnown RBP15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 NppbP40753 121 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Tgfb1i1Q62219 461 aa15.22■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Gnat3Q3V3I2 354 aa15.21■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Clca2Q8BG22 942 aa15.21■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Ppp1r42Q8R1Z4 357 aa15.21■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Akt1s1Q9D1F4 257 aa15.21■□□□□ 0.03
Ddx55-202ENSMUST00000111438 Npy5rO70342 466 aa15.21■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Cluap1Q8R3P7 413 aa15.21■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Trim34aQ99PP6 485 aa15.21■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Tceal9Q9DD24 104 aa15.21■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Sumf1Q8R0F3 372 aa15.2■□□□□ 0.02
Ddx55-202ENSMUST00000111438 NgdnQ9DB96 315 aaKnown RBP15.2■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Srgap3Q812A2 1099 aa15.2■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Foxo4Q9WVH3 505 aa15.2■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Kiaa0232Q80U59 1396 aaKnown RBP15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Cwc27Q3TKY6 469 aa15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Susd4Q8BH32 490 aa15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Togaram1Q6A070 1776 aaKnown RBP15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Cyp2c23E9Q5K4 494 aa15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Plcb3P51432 1234 aaKnown RBP15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Wwc1Q5SXA9 1104 aa15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Sart3Q9JLI8 962 aaKnown RBP15.19■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Sned1Q70E20 1403 aa15.18■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Mmp8O70138 465 aa15.18■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Kif13bA0A286YCV9 1847 aa15.18■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Kif23E9Q5G3 953 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Dctn1O08788 1281 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Atl3Q91YH5 541 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Armcx1Q9CX83 456 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Lrp5Q91VN0 1614 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 GpkowQ56A08 488 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Tktl2Q9D4D4 627 aa15.17■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Cops6O88545 324 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Tlr8P58682 1032 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Zc3h12cQ5DTV4 884 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 GptQ8QZR5 496 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Mapk8ip1Q9WVI9 707 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 VirmaA2AIV2 1811 aaKnown RBP15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Jdp2P97875 163 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 VgfQ0VGU4 617 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Ttc19Q8CC21 365 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Stox1B2RQL2 990 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Rbm26Q6NZN0 1012 aaKnown RBP15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Gimap8Q75N62 688 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Nphp1Q9QY53 687 aa15.16■□□□□ 0.02
Ddx55-202ENSMUST00000111438 StrcQ8VIM6 1809 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Mybbp1aQ7TPV4 1344 aaKnown RBP15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Hsp90ab1P11499 724 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms