RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Cbfa2t2O70374 594 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Dnajc5bQ9CQ94 199 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Six6os1Q9CTN5 574 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Kdm3aQ6PCM1 1323 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Dapk3O54784 448 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Znf653Q6YND2 615 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Tex2Q6ZPJ0 1128 aaKnown RBP12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Rassf2Q8BMS9 326 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Ccdc186Q8C9S4 917 aa12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Elp1Q7TT37 1333 aaKnown RBP12.28□□□□□ -0.44
Vcan-202ENSMUST00000109544 Ccdc114Q3UX62 658 aa12.27□□□□□ -0.44
Vcan-202ENSMUST00000109544 Tnip1Q9WUU8 647 aa12.27□□□□□ -0.44
Vcan-202ENSMUST00000109544 Igf2bp2Q5SF07 592 aaKnown RBP12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Spa17Q62252 149 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tubb2aQ7TMM9 445 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tubb2bQ9CWF2 445 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rrs1Q9CYH6 365 aaKnown RBP12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tnni2P13412 182 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Stat1P42225 749 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Sf3b2Q3UJB0 878 aaKnown RBP12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ift88Q61371 824 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Plekhm2Q80TQ5 1018 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Nup133Q8R0G9 1155 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gm1043A0A140LJC2 1431 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tbc1d9Q3UYK3 1264 aa12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Prpf40aQ9R1C7 953 aaKnown RBP12.27□□□□□ -0.45
Vcan-202ENSMUST00000109544 Zfp644E9QA22 1323 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ccdc6D3YZP9 469 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 L3mbtl2P59178 703 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Map3k13Q1HKZ5 959 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Kdm2bQ6P1G2 1309 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Cfap73J3QPZ5 306 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Map3k9Q3U1V8 1077 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tspyl2Q7TQI8 677 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Mrps27Q8BK72 415 aaKnown RBP12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Klhl10Q9D5V2 608 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ccdc148Q6P5U8 527 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Krt79Q8VED5 531 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Mcm6P97311 821 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Kif5bQ61768 963 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Pde4bB1AWC9 736 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Top1Q04750 767 aaKnown RBP12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Kcnh5Q920E3 988 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Clip2Q9Z0H8 1047 aa12.26□□□□□ -0.45
Vcan-202ENSMUST00000109544 Krt15Q61414 452 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Cfap100Q80VN0 613 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Fermt2Q8CIB5 680 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ube3aO08759 870 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 SlmapQ3URD3 845 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Usp37Q8C0R0 979 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Polr3dQ91WD1 398 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 NgdnQ9DB96 315 aaKnown RBP12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Aimp1P31230 310 aaKnown RBP12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Znf692Q3U381 531 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Fmnl3Q6ZPF4 1028 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tmem266Q8BZB3 538 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 4933428M09RikQ9D3X3 192 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Cers3Q1A3B0 383 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rassf4Q8CB96 322 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Syce1Q9D495 329 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gucy1a3Q9ERL9 691 aa12.25□□□□□ -0.45
Vcan-202ENSMUST00000109544 Sycp2lA0A0M3U1B0 842 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Akap8Q9DBR0 687 aaKnown RBP12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Sdad1Q80UZ2 687 aaKnown RBP12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 DroshaQ5HZJ0 1373 aaKnown RBP12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Gm28510A0A087WP28 240 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ccdc122Q8BVN0 290 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Kank1E9Q238 1360 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Fermt1P59113 677 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Fam177a1Q8BR63 207 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Nphp3Q7TNH6 1325 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Fam163aQ8CAA5 168 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rab3il1Q8VDV3 383 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Zbtb22Q9Z0G7 638 aa12.24□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tbc1d8bA3KGB4 1114 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Bin1O08539 588 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ssrp1Q08943 708 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Smarca5Q91ZW3 1051 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Cep19Q9CQA8 163 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ppfia1B2RXQ2 1266 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Zhx1P70121 873 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Sept11Q8C1B7 431 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Klhl30Q8C3F7 581 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rbm33Q9CXK9 1231 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Tbc1d8Q9Z1A9 1134 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 NrkQ9R0G8 1455 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Zscan29E9Q5B4 869 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Dact3Q0PHV7 610 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Spg7Q3ULF4 781 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Kiaa1211Q5PR69 1207 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Eif2aQ8BJW6 581 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Rapgef3Q8VCC8 918 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ankrd44B2RXR6 993 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ccdc152E9PX14 254 aa12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Specc1lQ2KN98 1118 aaKnown RBP12.23□□□□□ -0.45
Vcan-202ENSMUST00000109544 Metap2O08663 478 aaKnown RBP12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Ift74Q8BKE9 600 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 PaskQ8CEE6 1383 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Sh2d4bA6X942 431 aa12.22□□□□□ -0.45
Vcan-202ENSMUST00000109544 Camk4P08414 469 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms