RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Abcc6Q9R1S7 1498 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Talpid3E9PV87 1520 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Gm7347D3YYI9 267 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Fam184aE9PW83 1143 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Speer4aF8VPX6 267 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Metap2O08663 478 aaKnown RBP12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 ImpactO55091 318 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Sh3d21Q7TSG5 549 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Shroom2A2ALU4 1481 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tacc1Q6Y685 774 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Atf7Q8R0S1 413 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mrpl44Q9CY73 333 aaKnown RBP12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Plekho1Q9JIY0 408 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Cfap74Q3UY96 1578 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Abca5Q8K448 1642 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Abcc2Q8VI47 1543 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Jakmip2D3YXK0 820 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Cc2d1bQ8BRN9 848 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Triml1Q8BVP1 470 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 GckrQ91X44 587 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Taf7Q9R1C0 341 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Izumo3A6PWV3 263 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ccdc181Q80ZU5 509 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 GlmnQ8BZM1 596 aa12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Arhgef12Q8R4H2 1543 aaKnown RBP12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Terf2O35144 541 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Znf518aB2RRF6 1478 aaKnown RBP12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ankrd13dQ6PD24 605 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Otud6bQ8K2H2 294 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Peg3Q3URU2 1571 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ppfia1B2RXQ2 1266 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Zscan29E9Q5B4 869 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Nkx1-2P42580 305 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ces1aE9PYP1 563 aa12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Pafah1b1P63005 410 aaKnown RBP12.81□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Rbm26Q6NZN0 1012 aaKnown RBP12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 St5Q924W7 1134 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 DymQ8CHY3 669 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Brms1Q99N20 246 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Dnajc10Q9DC23 793 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Arhgef40Q3UPH7 1517 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Lrrc9Q8CDN9 1456 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Nphp3Q7TNH6 1325 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Rbbp8nlA2ABX0 614 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Grm8P47743 908 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Pa2g4P50580 394 aaKnown RBP12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Kdm5cP41230 1554 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Trim27Q62158 513 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tom1O88746 492 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Stx8O88983 236 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Kdm3aQ6PCM1 1323 aa12.8□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mast1Q9R1L5 1570 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Terf1P70371 421 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Matr3Q8K310 846 aaKnown RBP12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Lrrc7Q80TE7 1490 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mctp2Q5RJH2 878 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Lmod1Q8BVA4 595 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Serpina10Q8R121 448 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Rcan3Q9JKK0 239 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Usp5P56399 858 aaKnown RBP12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 CalcaP70160 136 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ccdc150Q8CDI7 1110 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Rrp9Q91WM3 475 aaKnown RBP12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Rnf34Q99KR6 376 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Pbrm1Q8BSQ9 1634 aaKnown RBP12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Stat1P42225 749 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 2310002L09RikQ9D7L5 217 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mug2P28666 1451 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Pola1P33609 1465 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Hoxb7P09024 217 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Gimap8Q75N62 688 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tceanc2Q8R2M0 207 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Dnaaf4Q8R368 420 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Vps16Q920Q4 839 aa12.79□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Sdc2P43407 202 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tbc1d32Q3URV1 1296 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Bag4Q8CI61 457 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Igbp1bQ9QZ29 343 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Spag5Q7TME2 1165 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Slc1a4O35874 532 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mcm4P49717 862 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Jarid2Q62315 1234 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Ncapg2Q6DFV1 1138 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Api5O35841 504 aaKnown RBP12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Krt25Q8VCW2 446 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Cnot6lQ8VEG6 555 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Dph6Q9CQ28 267 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 MicalclQ9D5U9 680 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Kdm3bQ6ZPY7 1562 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Slc4a4O88343 1079 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Sil1Q9EPK6 465 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Homer1Q9Z2Y3 366 aa12.78□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Fbf1A2A870 1173 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Kifc2O08672 792 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Dennd4bQ3U1Y4 1499 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Kmt5bQ3U8K7 883 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tmem266Q8BZB3 538 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Hmg20bQ9Z104 317 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 PalldQ9ET54 1408 aa12.77□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Gm21985Q6P6P5 1106 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms