RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Kcnn1Q9EQR3 537 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Tax1bp1Q3UKC1 814 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Tbc1d31Q6NXY1 996 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 ImmtQ8CAQ8 757 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Top1Q04750 767 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ttll12Q3UDE2 639 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Wdr93Q402B2 695 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Spty2d1Q68FG3 682 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Naa25Q8BWZ3 972 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Klhl30Q8C3F7 581 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ssr1Q9CY50 286 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Mug1P28665 1476 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Atp6v1aP50516 617 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zpr1Q62384 459 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ccdc148Q6P5U8 527 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Wdr3Q8BHB4 942 aaKnown RBP11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Shtn1Q8K2Q9 631 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Znf131Q8K3J5 619 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Znf568E9PYI1 671 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Lrriq1Q0P5X1 1673 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zkscan16A2ALW2 728 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Atp8b3Q6UQ17 1335 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Nphp3Q7TNH6 1325 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 3425401B19RikD3Z1D3 1412 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Nbr1P97432 988 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Mipol1Q9D9F8 279 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ttc21aQ8C0S4 1314 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Lrrcc1Q69ZB0 1026 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Znf653Q6YND2 615 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zswim4Q8C7B8 1101 aa11.79□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ppfia1B2RXQ2 1266 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ccdc152E9PX14 254 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Fkbp4P30416 458 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 L1td1Q587J6 782 aaKnown RBP11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Trerf1Q8BXJ2 1205 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Lonp2Q9DBN5 852 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zscan20B2KFW1 1030 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zscan29E9Q5B4 869 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Sdc2P43407 202 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Cplx4Q80WM3 160 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Commd10Q8JZY2 202 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Slc26a8Q8R0C3 999 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 PaskQ8CEE6 1383 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Exoc6bA6H5Z3 810 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Zfp51Q3U4L8 781 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Hmg20bQ9Z104 317 aa11.78□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ncbp1Q3UYV9 790 aaKnown RBP11.77□□□□□ -0.52
Lig4-201ENSMUST00000095476 Pdzrn3Q69ZS0 1063 aa11.77□□□□□ -0.52
Lig4-201ENSMUST00000095476 Rsrc1Q9DBU6 334 aa11.77□□□□□ -0.52
Lig4-201ENSMUST00000095476 Rbm42Q91V81 474 aaKnown RBP11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Evi5lH3BKQ3 813 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Hdhd2Q3UGR5 259 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Lrrfip1Q3UZ39 729 aaKnown RBP11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rnf34Q99KR6 376 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Krt84Q99M73 603 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Exoc3l2D3YUP5 789 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Fnbp4Q6ZQ03 1031 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 NexmifQ5DTT1 1515 aa11.77□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cct2P80314 535 aaKnown RBP11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Map3k13Q1HKZ5 959 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 HnrnpmQ9D0E1 729 aaKnown RBP11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gm28510A0A087WP28 240 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Akap2O54931 893 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 TmpoQ61033 693 aaKnown RBP11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Iffo1Q8BXL9 562 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 AidaQ8C4Q6 305 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 4921504E06RikQ8CET2 560 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Frat2Q8K025 231 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Grin2aP35436 1464 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Neo1P97798 1493 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Opa1P58281 960 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 EsrrbQ61539 433 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Arfgap2Q99K28 520 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Slx4Q6P1D7 1565 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Tubb2aQ7TMM9 445 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Tubb2bQ9CWF2 445 aa11.76□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ppp1r15aP17564 657 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rab3gap1Q80UJ7 981 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Sil1Q9EPK6 465 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cep63Q3UPP8 700 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Nxf2Q4ZGD8 691 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ehbp1Q69ZW3 1231 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gigyf1Q99MR1 1044 aaKnown RBP11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Dapk3O54784 448 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Clec11aO88200 328 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Morc2aQ69ZX6 1030 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cep55Q8BT07 462 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Cnpy2Q9QXT0 182 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ddx46Q569Z5 1032 aaKnown RBP11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Fmnl3Q6ZPF4 1028 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ano1Q8BHY3 960 aa11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Bag3Q9JLV1 577 aaKnown RBP11.75□□□□□ -0.53
Lig4-201ENSMUST00000095476 Gbp1Q01514 589 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Rassf2Q8BMS9 326 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Ndufab1Q9CR21 156 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Naip6Q9JIB6 1403 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Fbf1A2A870 1173 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Abl1P00520 1123 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 Adcy3Q8VHH7 1145 aa11.74□□□□□ -0.53
Lig4-201ENSMUST00000095476 UvssaQ9D479 717 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms