RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Tgfb1i1Q62219 461 aa12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Sumf1Q8R0F3 372 aa12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Zc3h12cQ5DTV4 884 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Q8C5K5 320 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Nav1Q8CH77 1875 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Fam198bQ3UPI1 517 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Cyp7a1Q64505 503 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ripor2Q80U16 1078 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Smc4Q8CG47 1286 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Fam213aQ9CYH2 218 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Rgs17Q9QZB0 210 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 MeiocA2AG06 965 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Eva1cP58659 440 aa12.34□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 CltaO08585 235 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 4930567H17RikQ3V0K5 233 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 NexnQ7TPW1 607 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Stox1B2RQL2 990 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Gnat3Q3V3I2 354 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 VeztQ3ZK22 780 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Trim27Q62158 513 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Nphp1Q9QY53 687 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Myo5bP21271 1818 aa12.33□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 AK157302I3ITR1 129 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ier5O89113 308 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Slurp2P0DP59 97 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Eif4g2Q62448 906 aaKnown RBP12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Isca1Q9D924 129 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Cops6O88545 324 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Rbm5Q91YE7 815 aaKnown RBP12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 PappaQ8R4K8 1624 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Atp8b2P98199 1209 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Adora1Q60612 326 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Amhr2Q8K592 568 aa12.32□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Shank3Q4ACU6 1730 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Dbndd1Q9CZ00 160 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 CoblQ5NBX1 1337 aaKnown RBP12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Kdm2bQ6P1G2 1309 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Tm6sf1P58749 370 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 SkilQ60665 675 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Susd4Q8BH32 490 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 FanclQ9CR14 375 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 LratQ9JI60 231 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Stk36Q69ZM6 1316 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Neurod6P48986 337 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ezh2Q61188 746 aaKnown RBP12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Mum1Q6DID5 682 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Gimap8Q75N62 688 aa12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 CarsQ9ER72 831 aaKnown RBP12.31□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Phf23Q8BSN5 401 aa12.3□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 EappQ5BU09 281 aa12.3□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 AampJ3QN89 436 aa12.3□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Smc5Q8CG46 1101 aaKnown RBP12.3□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ppm1fQ8CGA0 452 aa12.3□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Cyp19a1P28649 503 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Snai1Q02085 264 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ccdc6D3YZP9 469 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 NppbP40753 121 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Edc3Q8K2D3 508 aaKnown RBP12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 CpzQ8R4V4 654 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Trim34bJ3QNR8 485 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Dhx38Q80X98 1228 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Clca2Q8BG22 942 aa12.29□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Prr29B1ARI9 187 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 EspnQ9ET47 871 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Trim30dE9PWL0 497 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Kif23E9Q5G3 953 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ets1P27577 440 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Ccdc27Q3V036 639 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 OscarQ8VBT3 265 aa12.28□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Apba2P98084 750 aa12.27□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Eif2s2Q99L45 331 aaKnown RBP12.27□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Rrs1Q9CYH6 365 aaKnown RBP12.27□□□□□ -0.44
Ccdc38-201ENSMUST00000092215 Anxa1P10107 346 aaKnown RBP12.27□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Arid3aQ62431 601 aa12.27□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Rbm26Q6NZN0 1012 aaKnown RBP12.27□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Pnmal2G3X9N3 661 aa12.27□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Mmp8O70138 465 aa12.26□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Nolc1E9Q5C9 702 aaKnown RBP12.26□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 AbraQ8BUZ1 375 aa12.26□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Atl3Q91YH5 541 aa12.26□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Foxo3Q9WVH4 672 aa12.26□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Ehd4Q9EQP2 541 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 InsrrQ9WTL4 1300 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Ssc5dQ8BV57 1371 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 SowahdQ8BY98 327 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Zbtb38Q3LR78 1197 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 1810065E05RikQ5NC41 235 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Zbtb3Q91X45 518 aa12.25□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Hmgb2P30681 210 aaKnown RBP12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 VgfQ0VGU4 617 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 GapdhsQ64467 440 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Nlrp9bQ66X22 1003 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 BcorQ8CGN4 1759 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Zbtb45Q52KG4 520 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Popdc2Q9ES82 367 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Mcmdc2E9Q956 681 aa12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 PnnO35691 725 aaKnown RBP12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Hsp90ab1P11499 724 aaKnown RBP12.24□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Atg4a-psA0A0G2JFS9 396 aa12.23□□□□□ -0.45
Ccdc38-201ENSMUST00000092215 Anp32aO35381 247 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms