RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 MecomP14404 1042 aa13.81□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Rps6ka5Q8C050 863 aa13.81□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Tnrc6bQ8BKI2 1810 aaKnown RBP13.81□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Ppfia1B2RXQ2 1266 aa13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Eif4a1P60843 406 aaKnown RBP13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Ncbp1Q3UYV9 790 aaKnown RBP13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Mrpl50Q8VDT9 159 aaKnown RBP13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Cdk12Q14AX6 1484 aaKnown RBP13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Gsdma3Q5Y4Y6 464 aa13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Camta1A2A891 1682 aa13.8□□□□□ -0.2
Col9a1-202ENSMUST00000088349 FosbP13346 338 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Igfbp6P47880 238 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Ppfia3P60469 1194 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Zranb3Q6NZP1 1069 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Nap1l3Q794H2 544 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Brpf3B2KF05 1204 aaKnown RBP13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Cbx1P83917 185 aaKnown RBP13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Nom1Q3UFM5 854 aaKnown RBP13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 CoilQ5SU73 570 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Bend3Q6PAL0 825 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Sirt1Q923E4 737 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Usp25P57080 1055 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Grpel1Q99LP6 217 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Ndufa8Q9DCJ5 172 aa13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Rreb1Q3UH06 1700 aaKnown RBP13.79□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Pnpla7A2AJ88 1352 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Rbm8a2A0A0N4SUH6 174 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Trim30aP15533 496 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 EzrP26040 586 aaKnown RBP13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 4930504O13RikQ8C5Z9 145 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Polr3dQ91WD1 398 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 BccipQ9CWI3 316 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Rbm8aQ9CWZ3 174 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Fmnl2A2APV2 1086 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Ddx11Q6AXC6 880 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Dzip1Q8BMD2 852 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 SrrtQ99MR6 875 aaKnown RBP13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 CemipQ8BI06 1361 aa13.78□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Tpd52l1O54818 204 aa13.77□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Kif3aP28741 701 aa13.77□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Tbc1d31Q6NXY1 996 aa13.77□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Add2Q9QYB8 725 aa13.77□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Abcc10Q8R4P9 1501 aa13.77□□□□□ -0.2
Col9a1-202ENSMUST00000088349 Neurod6P48986 337 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Tnnt2P50752 301 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Fam228bQ497Q6 232 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Cchcr1Q8K2I2 770 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Kcnf1Q7TSH7 493 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Taf5lQ91WQ5 589 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 NaspQ99MD9 773 aaKnown RBP13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ak2Q9WTP6 239 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Znf335A2A5K6 1337 aa13.77□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Samd1D3YXK1 519 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Cnnm1Q0GA42 951 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Slc26a8Q8R0C3 999 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Zbtb3Q91X45 518 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Dhx30Q99PU8 1217 aaKnown RBP13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Nfe2l3Q9WTM4 660 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ttll7A4Q9F0 912 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Esyt1Q3U7R1 1092 aaKnown RBP13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Kiaa0754Q69ZZ9 979 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 CrebrfQ8CDG5 640 aaKnown RBP13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 GckrQ91X44 587 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Echdc1Q9D9V3 322 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Nphp3Q7TNH6 1325 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Spata31d1bE9QA57 1361 aa13.76□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Lekr1B2RVN1 116 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Zkscan7E9PVW1 718 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Prkab2Q6PAM0 271 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 PigbQ9JJQ0 542 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 PdcQ9QW08 244 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Cnksr1A2A9K7 700 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Ugt1a5B2RT14 529 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Mctp1E9PV86 951 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Gm21698A0A087WQP8 267 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Gm21671G3UY31 267 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Mdm2P23804 489 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Nxf2Q4ZGD8 691 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Lmbr1lQ9D1E5 489 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 LratQ9JI60 231 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Igbp1bQ9QZ29 343 aa13.75□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Med1Q925J9 1575 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Tbc1d30Q69ZT9 766 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Sgsm2Q80U12 1005 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Inpp5bQ8K337 993 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Iffo2Q8R2V2 512 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Bicd2Q921C5 820 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 TnmdQ9EP64 317 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 TimelessQ9R1X4 1197 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Slit3Q9WVB4 1523 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Zpr1Q62384 459 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Dixdc1Q80Y83 711 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Frmd3Q8BHD4 595 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Nrbp1Q99J45 535 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Amotl1Q9D4H4 968 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Fam84aQ9D650 292 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Add3Q9QYB5 706 aaKnown RBP13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Chd2E9PZM4 1827 aaKnown RBP13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Tet3Q8BG87 1668 aa13.74□□□□□ -0.21
Col9a1-202ENSMUST00000088349 Tyro3P55144 880 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms