RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Gjb2Q00977 226 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Sass6Q80UK7 654 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Sytl4Q9R0Q1 673 aa9.81□□□□□ -0.84
Cdc40-201ENSMUST00000044166 RereQ80TZ9 1558 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Lcmt1A0A0U1RNF2 332 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Klhl34A2AI76 644 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 RdxP26043 583 aaKnown RBP9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Adgrb1Q3UHD1 1582 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Q3TQI7 289 aaKnown RBP9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Oxsr1Q6P9R2 527 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Bank1Q80VH0 783 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Pof1bQ8K4L4 587 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Stk36Q69ZM6 1316 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 PplQ9R269 1755 aa9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Chd4Q6PDQ2 1915 aaKnown RBP9.8□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Prim1P20664 417 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Fam83gQ5SWY7 812 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Ccne1Q61457 408 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nup88Q8CEC0 753 aaKnown RBP9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Rad50P70388 1312 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Zkscan7E9PVW1 718 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Tpd52l1O54818 204 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Map2k1P31938 393 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cfap157Q0VFX2 523 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Gm156Q58A37 223 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nop14Q8R3N1 860 aaKnown RBP9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Tbc1d8Q9Z1A9 1134 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Dync1i1O88485 628 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cdkn1cP49919 348 aa9.79□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Syt1P46096 421 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Dnajc2P54103 621 aaKnown RBP9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Usp25P57080 1055 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Snx13Q6PHS6 957 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Unc5clQ6R653 518 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 PtpruB1AUH1 1446 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nbr1P97432 988 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Kcnf1Q7TSH7 493 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Wdr24Q8CFJ9 790 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Cchcr1Q8K2I2 770 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Rufy3Q9D394 469 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Mlh1Q9JK91 760 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Zfp804bA0A0G2JGH6 1343 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 EappQ5BU09 281 aa9.78□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Nphp3Q7TNH6 1325 aa9.77□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Sema3fO88632 785 aa9.77□□□□□ -0.84
Cdc40-201ENSMUST00000044166 HalP35492 657 aa9.77□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Igbp1bQ9QZ29 343 aa9.77□□□□□ -0.84
Cdc40-201ENSMUST00000044166 Kif13aQ9EQW7 1749 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nwd1A6H603 1563 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Igsf1Q7TQA1 1317 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 CebpzP53569 1052 aaKnown RBP9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Hdgfl1Q2VPR5 283 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Babam1Q3UI43 333 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nxf2Q4ZGD8 691 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Add3Q9QYB5 706 aaKnown RBP9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Mad1l1Q9WTX8 717 aaKnown RBP9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nfatc2ipO09130 412 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ccdc34Q3UI66 367 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Usp48Q3V0C5 1052 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Rab3gap1Q80UJ7 981 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Pes1Q9EQ61 584 aaKnown RBP9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 MycbpQ9EQS3 103 aa9.77□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Wdr33Q8K4P0 1330 aaKnown RBP9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Oas2E9Q9A9 742 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nap1l3Q794H2 544 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 DpydQ8CHR6 1025 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Themis2Q91YX0 663 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 NaspQ99MD9 773 aaKnown RBP9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Iqca1Q9CUL5 857 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ttc27Q8CD92 847 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 HypkQ9CR41 129 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Stk3Q9JI10 497 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Zbtb22Q9Z0G7 638 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Brpf3B2KF05 1204 aaKnown RBP9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Cct4P80315 539 aaKnown RBP9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 CtifQ6PEE2 600 aaKnown RBP9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Hmgn5Q9JL35 406 aa9.76□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Spata31d1bE9QA57 1361 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 1700006A11RikB9EHI3 544 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Top1mtQ8R4U6 593 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Q9D9S1 216 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 PzpQ61838 1495 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Cd22P35329 862 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Fez2Q6TYB5 348 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Tti2Q8BGV4 512 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Astn2Q80Z10 1352 aa9.75□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Yeats2Q3TUF7 1407 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Zrsr2Q62377 462 aaKnown RBP9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Rassf4Q8CB96 322 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Add2Q9QYB8 725 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Gemin5Q8BX17 1502 aaKnown RBP9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 FancaQ9JL70 1439 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Card6E9PWH2 1175 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 CgnP59242 1191 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Foxp4Q9DBY0 795 aaKnown RBP9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Dip2aQ8BWT5 1523 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Tyro3P55144 880 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Bach1P97302 739 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Lrriq3Q14DL3 633 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Pde3bQ61409 1100 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms