RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Amotl2Q8K371 772 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Krt25Q8VCW2 446 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Kdm6bQ5NCY0 1641 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Rad50P70388 1312 aa12.02□□□□□ -0.48
Ccdc40-201ENSMUST00000035935 Cdca8Q8BHX3 289 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Brms1Q99N20 246 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Eif5P59325 429 aaKnown RBP12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Gas2l2Q5SSG4 860 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Trim28Q62318 834 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Adck5Q80V03 582 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Egfem1Q8C088 590 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Dot1lQ6XZL8 1540 aa12.02□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Iqca1Q9CUL5 857 aa12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Zkscan7E9PVW1 718 aa12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Hoxc9P09633 260 aa12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ampd3O08739 766 aa12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Abcf1Q6P542 837 aaKnown RBP12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Dnajc2P54103 621 aaKnown RBP12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Srgap1Q91Z69 1062 aa12.01□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ccdc66Q6NS45 935 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Golim4Q8BXA1 655 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Tshz3Q8CGV9 1081 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Stx1aO35526 288 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Stxbp4Q9WV89 557 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ier5O89113 308 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ell2Q3UKU1 639 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ccdc158Q8CDI6 1109 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rdm1Q9CQK3 281 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Lmbr1lQ9D1E5 489 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Speer4dL7N216 212 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Fam160b2Q80YR2 744 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Klc3Q91W40 508 aa12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rbm10Q99KG3 930 aaKnown RBP12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ftsj3Q9DBE9 838 aaKnown RBP12□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Kdm4cQ8VCD7 1054 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Atg3Q9CPX6 314 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Efcab2Q9CQ46 164 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Plekho1Q9JIY0 408 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rbm8a2A0A0N4SUH6 174 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rbbp8nlA2ABX0 614 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Tm6sf1P58749 370 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Morc2aQ69ZX6 1030 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ppm1fQ8CGA0 452 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rbm8aQ9CWZ3 174 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Dnajc10Q9DC23 793 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Cwc15Q9JHS9 229 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Mmp8O70138 465 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 EappQ5BU09 281 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ltv1Q6NSQ7 470 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Tarbp1E9Q368 1579 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Mcm3P25206 812 aaKnown RBP11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Traf3ip1Q149C2 625 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ccdc102aQ3TMW1 549 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Exoc5Q3TPX4 708 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Tmc2Q8R4P4 888 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 RestQ8VIG1 1082 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Chrna2Q91X60 512 aa11.99□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Abcd1P48410 736 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Fam13bQ8K2H3 851 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rnf17Q99MV7 1640 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Asxl2Q8BZ32 1370 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Clasp1Q80TV8 1535 aaKnown RBP11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rad23bP54728 416 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Gm21985Q6P6P5 1106 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 TxlnbQ8VBT1 685 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ccdc172Q810N9 267 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Pknox2Q8BG99 474 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Uggt1Q6P5E4 1551 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Hecw1Q8K4P8 1604 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Izumo3A6PWV3 263 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Gas2l3Q3UWW6 683 aa11.98□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Prim1P20664 417 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rlbp1Q9Z275 317 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Cep170Q6A065 1588 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Kdm5aQ3UXZ9 1690 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Slx4ipQ9D7Y9 413 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Neurl4Q5NCX5 1563 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Adcy5P84309 1262 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Spg7Q3ULF4 781 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ppp1r10Q80W00 888 aaKnown RBP11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 ThemisQ8BGW0 636 aa11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Luzp1Q8R4U7 1068 aaKnown RBP11.97□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Tnni2P13412 182 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Slf2Q6P9P0 1278 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Nek11Q8C0Q4 628 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Gnl2Q99LH1 728 aaKnown RBP11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Ncapd2Q8K2Z4 1392 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Rims1Q99NE5 1463 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Lamb3Q61087 1168 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Fam213aQ9CYH2 218 aa11.96□□□□□ -0.49
Ccdc40-201ENSMUST00000035935 Nap1l1P28656 391 aaKnown RBP11.96□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nlgn1Q99K10 843 aa11.96□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Nap1l5Q9JJF0 156 aa11.96□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Cct2P80314 535 aaKnown RBP11.96□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Pde3aQ9Z0X4 1141 aa11.96□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Usp19Q3UJD6 1360 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Fam193aQ8CGI1 1231 aaKnown RBP11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Ces1hD3Z298 562 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 Spag5Q7TME2 1165 aa11.95□□□□□ -0.5
Ccdc40-201ENSMUST00000035935 A0A0U1RNP2 1173 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 95.7 ms