RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Mcmdc2E9Q956 681 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Anapc15P60007 132 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Brinp3Q499E0 766 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Polr3gQ6NXY9 223 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 NexnQ7TPW1 607 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Dhx30Q99PU8 1217 aaKnown RBP8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Efcab2Q9CQ46 164 aa8.4□□□□□ -1.06
Csde1-201ENSMUST00000029446 Mmp8O70138 465 aa8.4□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ddx58Q6Q899 926 aa8.4□□□□□ -1.07
Csde1-201ENSMUST00000029446 Slc34a2Q9DBP0 697 aa8.4□□□□□ -1.07
Csde1-201ENSMUST00000029446 Stard3nlQ9DCI3 235 aa8.4□□□□□ -1.07
Csde1-201ENSMUST00000029446 Pnmal2G3X9N3 661 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Babam1Q3UI43 333 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Q8C5K5 320 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Asic4Q7TNS7 539 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 RgmbQ7TQ33 436 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 HomezQ80W88 542 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Sf3a1Q8K4Z5 791 aaKnown RBP8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 ApobrQ8VBT6 942 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 DccP70211 1447 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ier5O89113 308 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Noc3lQ8VI84 807 aaKnown RBP8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Bcar3Q9QZK2 820 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Sipa1l2Q80TE4 1722 aa8.39□□□□□ -1.07
Csde1-201ENSMUST00000029446 Arhgef1Q61210 920 aaKnown RBP8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Fkbp5Q64378 456 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Col15a1O35206 1367 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 MpndQ3TV65 487 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Jakmip1Q8BVL9 626 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Nfat5Q9WV30 1534 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Grm8P47743 908 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Cyp2d12Q8BVD2 504 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 KinQ8K339 391 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Utp3Q9JI13 469 aaKnown RBP8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Usp48Q3V0C5 1052 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 HellsQ60848 821 aa8.38□□□□□ -1.07
Csde1-201ENSMUST00000029446 Phlpp1Q8CHE4 1687 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Atg4a-psA0A0G2JFS9 396 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Gm10093D3YYI8 482 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Hdac1O09106 482 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 FosbP13346 338 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 CalrP14211 416 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Kiaa0754Q69ZZ9 979 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Atg4aQ8C9S8 396 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Gripap1Q8VD04 806 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Smc3Q9CW03 1217 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Mad1l1Q9WTX8 717 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 AdnpQ9Z103 1108 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Trpm3Q5F4S9 1721 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Zrsr2Q62377 462 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ddx11Q6AXC6 880 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Cdhr2E9Q7P9 1308 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Becn1O88597 448 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Kcnj4P52189 445 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Bend3Q6PAL0 825 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ssfa2Q922B9 1252 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Bicc1Q99MQ1 977 aaKnown RBP8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Thsd7aQ69ZU6 1645 aa8.37□□□□□ -1.07
Csde1-201ENSMUST00000029446 Pdia3P27773 505 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 R3hcc1Q8BSI6 488 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Iqsec3Q3TES0 1195 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Tex2Q6ZPJ0 1128 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Zkscan1Q8BGS3 561 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ccer1Q9CQL2 403 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Lmbr1lQ9D1E5 489 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Msh6P54276 1358 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Pus7B7ZNL8 666 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Nucb1Q02819 459 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Prkab2Q6PAM0 271 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Rhot2Q8JZN7 620 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ush1cQ9ES64 910 aa8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Nup153E9Q3G8 1462 aaKnown RBP8.36□□□□□ -1.07
Csde1-201ENSMUST00000029446 Kif4P33174 1231 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Soga3Q6NZL0 945 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Nap1l3Q794H2 544 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Tmem87bQ8BKU8 555 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 AnlnQ8K298 1121 aaKnown RBP8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Mical1Q8VDP3 1048 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Fam114a1Q9D281 569 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Gnat3Q3V3I2 354 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Phf14Q9D4H9 881 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Sh3bgrQ9WUZ7 214 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Pde4dQ01063 747 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 GpkowQ56A08 488 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 PhaxQ9JJT9 385 aaKnown RBP8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Arfgef2A2A5R2 1792 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Jmjd4Q8BFT6 427 aa8.35□□□□□ -1.07
Csde1-201ENSMUST00000029446 Tom1O88746 492 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Exoc5Q3TPX4 708 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ccnl1Q52KE7 532 aaKnown RBP8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Erbb4Q61527 1308 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Mcm4P49717 862 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Sf3b2Q3UJB0 878 aaKnown RBP8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Ginm1Q91WR6 327 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Kcnn1Q9EQR3 537 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Atp10bB1AWN4 1474 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 AceP09470 1312 aa8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Cbx1P83917 185 aaKnown RBP8.34□□□□□ -1.07
Csde1-201ENSMUST00000029446 Cpa2Q504N0 417 aa8.33□□□□□ -1.08
Csde1-201ENSMUST00000029446 BcanQ61361 883 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms