RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Dync1i1O88485 628 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Mmel1Q9JLI3 765 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Fbf1A2A870 1173 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Pip4k2bQ80XI4 416 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Ripk4Q9ERK0 786 aa12.53□□□□□ -0.4
Ciita-201ENSMUST00000023147 Cyb5rlB1AS42 316 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 Zfp42P22227 288 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 Wdhd1P59328 1117 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 SlmapQ3URD3 845 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 Gas2l2Q5SSG4 860 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 ImmtQ8CAQ8 757 aaKnown RBP12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 Sept6Q9R1T4 434 aa12.52□□□□□ -0.4
Ciita-201ENSMUST00000023147 Babam1Q3UI43 333 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Vamp4O70480 141 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Fsd1Q7TPM6 496 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Dydc1Q9D9T0 175 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Scaf11E9PZM7 1456 aaKnown RBP12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Fsd2Q8BZ52 692 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 GlmnQ8BZM1 596 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ddx54Q8K4L0 874 aaKnown RBP12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Pof1bQ8K4L4 587 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Antxr1Q9CZ52 562 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cfap53Q9D439 514 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Bcar3Q9QZK2 820 aa12.52□□□□□ -0.41
Ciita-201ENSMUST00000023147 Vgll3P85442 326 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Tax1bp1Q3UKC1 814 aaKnown RBP12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ncapg2Q6DFV1 1138 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cfap69Q8BH53 942 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Clasp1Q80TV8 1535 aaKnown RBP12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 TkfcQ8VC30 578 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Trap1aP19473 224 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ccdc162pQ0VG85 912 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gsdma2Q32M21 443 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Mum1Q6DID5 682 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Kiaa1524Q8BWY9 907 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ift57Q8BXG3 429 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 FanclQ9CR14 375 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Jade2Q6ZQF7 829 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gimap6Q8K349 305 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Rapgef4Q9EQZ6 1011 aa12.51□□□□□ -0.41
Ciita-201ENSMUST00000023147 Dnajc2P54103 621 aaKnown RBP12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Paxbp1P58501 919 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ggnbp2Q5SV77 696 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Tmx4Q8C0L0 335 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ttc5Q99LG4 440 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Mindy4Q3UQI9 744 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Rbm27Q5SFM8 1060 aaKnown RBP12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 GphnQ8BUV3 769 aaKnown RBP12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Smtnl1Q99LM3 459 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Chd1lQ9CXF7 900 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Fkbp4P30416 458 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ccdc39Q9D5Y1 937 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Hfm1D3Z4R1 1434 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gzf1Q4VBD9 706 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Anp32cQ64G17 123 aa12.5□□□□□ -0.41
Ciita-201ENSMUST00000023147 Idi2Q8BFZ6 227 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gnl2Q99LH1 728 aaKnown RBP12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 HnrnpmQ9D0E1 729 aaKnown RBP12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Pde4bB1AWC9 736 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Mcm3P25206 812 aaKnown RBP12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Usp25P57080 1055 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Nsrp1Q5NCR9 542 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Brf1Q8CFK2 676 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Tubb4aQ9D6F9 444 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gm45015A0A140LII9 184 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gm18336A0A140LIU8 765 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cfap73J3QPZ5 306 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Frat2Q8K025 231 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Irx4Q9QY61 515 aa12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Noc2lQ9WV70 747 aaKnown RBP12.49□□□□□ -0.41
Ciita-201ENSMUST00000023147 Nsd3Q6P2L6 1439 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Iqca1Q9CUL5 857 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Kiaa1107Q80TK0 1369 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Dennd6aQ8BH65 605 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cc2d1bQ8BRN9 848 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Rnf34Q99KR6 376 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cyp27a1Q9DBG1 533 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cdca8Q8BHX3 289 aa12.48□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gli2Q0VGT2 1544 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Zfp853A0A1D5RM95 733 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Nphp3Q7TNH6 1325 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Tsg101Q61187 391 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Abcf1Q6P542 837 aaKnown RBP12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Shtn1Q8K2Q9 631 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 ZwintQ9CQU5 252 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Ttc19Q8CC21 365 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 4921530L21RikQ9CQ47 274 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Cep152A2AUM9 1736 aaKnown RBP12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Uggt1Q6P5E4 1551 aa12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Bms1Q6PGF5 1284 aaKnown RBP12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Dnmt1P13864 1620 aaKnown RBP12.47□□□□□ -0.41
Ciita-201ENSMUST00000023147 Stx1aO35526 288 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Nom1Q3UFM5 854 aaKnown RBP12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 NgdnQ9DB96 315 aaKnown RBP12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Knop1Q9Z2Q2 478 aaKnown RBP12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 LarsQ8BMJ2 1178 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Flad1Q8R123 492 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Luzp1Q8R4U7 1068 aaKnown RBP12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Gm44503E9PYU5 387 aa12.46□□□□□ -0.41
Ciita-201ENSMUST00000023147 Eif3j1Q3UGC7 261 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms