RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SRP54P61011 504 aaKnown RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 HTD2P86397 168 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCZ1BP86790 482 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCZ1P86791 482 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 GCNT1Q02742 428 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 ITGA9Q13797 1035 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 RBM39Q14498 530 aaKnown RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC27A4Q6P1M0 643 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 DLEU7Q6UYE1 221 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 C9orf139Q6ZV77 190 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC24A5Q71RS6 500 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC16A9Q7RTY1 509 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 RBM23Q86U06 439 aaKnown RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 NLRP14Q86W24 1093 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 ELMOD2Q8IZ81 293 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 KIRREL3Q8IZU9 778 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCDC185Q8N715 623 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 LRTM2Q8N967 370 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SMYD1Q8NB12 490 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 TMEM185AQ8NFB2 350 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 OLIG1Q8TAK6 271 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SCARB1Q8WTV0 552 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 ARNTL2Q8WYA1 636 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SUSD6Q92537 303 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 C14orf79Q96F83 325 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SPAG8Q99932 426 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 WWTR1Q9GZV5 400 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 KCNMB3Q9NPA1 279 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 POLE3Q9NRF9 147 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 HOMER3Q9NSC5 361 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 PIGVQ9NUD9 493 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 PANK4Q9NVE7 773 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CTNNA3Q9UI47 895 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 DNPEPQ9ULA0 475 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 EXOC7Q9UPT5 735 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SH3GLB1Q9Y371 365 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 TMED7Q9Y3B3 224 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 TANC1Q9C0D5 1861 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 ZNF292O60281 2723 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 PTPRSQ13332 1948 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 COL4A6Q14031 1691 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 MACROD2A1Z1Q3 448 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCDC162PA2VCL2 907 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 A8MVM7 634 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 H3BMM5 538 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CHEK1O14757 476 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CPLX1O14810 134 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 NOL3O60936 208 aaKnown RBP4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 TSHBP01222 138 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CRYAAP02489 173 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SERPINF2P08697 491 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ANPEPP15144 967 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCND2P30279 289 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SRD5A2P31213 254 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 KIF5BP33176 963 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CNN1P51911 297 aaKnown RBP4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 MECOMQ03112 1051 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CDH18Q13634 790 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SQLEQ14534 574 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 STX1AQ16623 288 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 XKR3Q5GH77 459 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 C12orf60Q5U649 245 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 TCEAL6Q6IPX3 200 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 DHRS11Q6UWP2 260 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ASCL5Q7RTU5 278 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 PIGZQ86VD9 579 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 RFLNBQ8N5W9 214 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ARL6IP6Q8N6S5 226 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 VOPP1Q96AW1 172 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SPATA13Q96N96 652 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 IL12RB2Q99665 862 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 NKX3-1Q99801 234 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SHARPINQ9H0F6 387 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ABCG4Q9H172 646 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 CARD9Q9H257 536 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 RPAP3Q9H6T3 665 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ACOXLQ9NUZ1 547 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 SPASTQ9UBP0 616 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 ACACBO00763 2458 aa4.48□□□□□ -1.69
TRAPPC9-216ENST00000634178 PCSK5Q92824 1860 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 CHD6Q8TD26 2715 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 FRYLO94915 3013 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 SCN5AQ14524 2016 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 NKX6-3A6NJ46 265 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCL24O00175 119 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 CHUKO15111 745 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 CTAGE5O15320 804 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 SYT7O43581 403 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 KIF5CO60282 957 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 GMNNO75496 209 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 OR6A2O95222 327 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 CXCL14O95715 111 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 SNAI1O95863 264 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 PRSS1P07477 247 aa4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC9-216ENST00000634178 GHRP10912 638 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms