RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 NELL2Q99435 816 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 GPA33Q99795 319 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 ROGDIQ9GZN7 287 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 MVB12BQ9H7P6 319 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 RANGRFQ9HD47 186 aaPredicted RBP12.4□□□□□ -0.42
SKP2-209ENST00000620197 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 RAB23Q9ULC3 237 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 SNX7Q9UNH6 387 aa12.4□□□□□ -0.42
SKP2-209ENST00000620197 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
SKP2-209ENST00000620197 RAB36O95755 333 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 ACADLP28330 430 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 MAN2A2P49641 1150 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 XKP51811 444 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 HOXC5Q00444 222 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 IKZF1Q13422 519 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 C1orf94Q6P1W5 598 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 SLC9B2Q86UD5 537 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 CMTM8Q8IZV2 173 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 ZFAND1Q8TCF1 268 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 FYTTD1Q96QD9 318 aaKnown RBP12.4□□□□□ -0.43
SKP2-209ENST00000620197 RNF121Q9H920 327 aa12.4□□□□□ -0.43
SKP2-209ENST00000620197 LSM7Q9UK45 103 aaKnown RBP12.4□□□□□ -0.43
SKP2-209ENST00000620197 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 SH3BGRLO75368 114 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 CHI3L1P36222 383 aaPredicted RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 MMP12P39900 470 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 DGKGP49619 791 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 EPHB3P54753 998 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 ACSM1Q08AH1 577 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 HEPACAMQ14CZ8 416 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 Q6ZVU0 165 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 RBM45Q8IUH3 476 aaKnown RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 CACTIN-AS1Q8N1I8 211 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 TMEM19Q96HH6 336 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 LINC00615Q96LM1 132 aaPredicted RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 JAM3Q9BX67 310 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 OR51B5Q9H339 312 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 DDX28Q9NUL7 540 aaKnown RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 DKK3Q9UBP4 350 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 A0A0X1KG70 313 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 LEFTY2O00292 366 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 ALAS2P22557 587 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 SLC9A3P48764 834 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 CYP4F8P98187 520 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 COX10Q12887 443 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 DSG2Q14126 1118 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 EFR3AQ14156 821 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 IER5LQ5T953 404 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 LIPKQ5VXJ0 399 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 VASNQ6EMK4 673 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 KIF18BQ86Y91 864 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 SLC34A3Q8N130 599 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 POLR2J2Q9GZM3 115 aaKnown RBP12.39□□□□□ -0.43
SKP2-209ENST00000620197 TIGARQ9NQ88 270 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 CKAP5Q14008 2032 aa12.39□□□□□ -0.43
SKP2-209ENST00000620197 PLPP1O14494 284 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 PROM1O43490 865 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 CYP7B1O75881 506 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 TGFB1P01137 390 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 KLK1P06870 262 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 H1F0P07305 194 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 SSTR4P31391 388 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 BSGP35613 385 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 OR5P2Q8WZ92 322 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 ZNF689Q96CS4 500 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 GON7Q9BXV9 100 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 CDRT1O95170 752 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 SOX14O95416 240 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 YES1P07947 543 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 GPC1P35052 558 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 WNT4P56705 351 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 TMEM115Q12893 351 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 ZER1Q7Z7L7 766 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 TMEM163Q8TC26 289 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 TM4SF18Q96CE8 201 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 KDM4EB2RXH2 506 aaPredicted RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 SAP18O00422 153 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 TPD52L2O43399 206 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 HCN1O60741 890 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms