RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PROX1Q92786 737 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 DNASE1L2Q92874 299 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 POP5Q969H6 163 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 CLIP3Q96DZ5 547 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CNRIP1Q96F85 164 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 SLC35G5Q96KT7 338 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 AMDHD1Q96NU7 426 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 C6orf106Q9H6K1 298 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 MVB12BQ9H7P6 319 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 NEUROD4Q9HD90 331 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 ACER3Q9NUN7 267 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 TSC22D4Q9Y3Q8 395 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 TRBV4-1A0A0J9YWV2 114 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 M0R3H8 397 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 DNAJB6O75190 326 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 SEC14L2O76054 403 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 AIFM1O95831 613 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 IFNA14P01570 189 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 C21orf33P30042 268 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 TTKP33981 857 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ID2Q02363 134 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 LTB4RQ15722 352 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ABHD17CQ6PCB6 329 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ARMC8Q8IUR7 673 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PEX5LQ8IYB4 626 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GPR32P1Q8NGA4 272 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 WDR92Q96MX6 357 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PIP5K1AQ99755 562 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 MAPKAP1Q9BPZ7 522 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ZNF556Q9HAH1 456 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 RNF6Q9Y252 685 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 TPRKBQ9Y3C4 175 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 KCNE3Q9Y6H6 103 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 TOR1BO14657 336 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 FFAR1O14842 300 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 LCKP06239 509 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 PTNP21246 168 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ATP5A1P25705 553 aaKnown RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 NTSP30990 170 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 MASP1P48740 699 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 SH3BGRP55822 239 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 NFATC3Q12968 1075 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PIN1Q13526 163 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 C1orf61Q13536 156 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 KEAP1Q14145 624 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 MICAQ29983 383 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 DEFB134Q4QY38 66 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 Q6ZS52 159 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 TSPYL5Q86VY4 417 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 TRIM48Q8IWZ4 208 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GAB3Q8WWW8 586 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 RORBQ92753 470 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 TREX2Q9BQ50 279 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 FBXO9Q9UK97 447 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PFDN1O60925 122 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 NDUFS2O75306 463 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 SEMA7AO75326 666 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GASTP01350 101 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 HMGN2P05204 90 aaKnown RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 CELA2BP08218 269 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 TFPTP0C1Z6 253 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 PCMT1P22061 227 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 CD6P30203 668 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 HOXD11P31277 338 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 NUP107P57740 925 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
CIITA-212ENST00000618207 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
CIITA-212ENST00000618207 MAPK11Q15759 364 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GTF2IRD2BQ6EKJ0 949 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 KLHL17Q6TDP4 642 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 GTF2IRD2Q86UP8 949 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 CCDC103Q8IW40 242 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 SIMC1Q8NDZ2 872 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 FAR1Q8WVX9 515 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 APH1BQ8WW43 257 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 RLN3Q8WXF3 142 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 TBC1D20Q96BZ9 403 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ZNF347Q96SE7 839 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 FAIM2Q9BWQ8 316 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 RAB11FIP5Q9BXF6 653 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 ENPP4Q9Y6X5 453 aa11.73□□□□□ -0.53
CIITA-212ENST00000618207 OR6C74A6NCV1 312 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 TMEM247A6NEH6 219 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ZNF99A8MXY4 864 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 C2CD4DB7Z1M9 353 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms