RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
COMMD4-221ENST00000567935 AP4B1Q9Y6B7 739 aa13.8□□□□□ -0.2
COMMD4-221ENST00000567935 SLCO1B1Q9Y6L6 691 aa13.8□□□□□ -0.2
COMMD4-221ENST00000567935 SPACA6W5XKT8 324 aa13.8□□□□□ -0.2
COMMD4-221ENST00000567935 USP9XQ93008 2570 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-221ENST00000567935 COL12A1Q99715 3063 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 MGAQ8IWI9 3026 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 A0A0J9YVX5 310 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 A0A1W2PR48 441 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 PROM1O43490 865 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 NOBOXO60393 691 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CTSVO60911 334 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 UBXN7O94888 489 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 AIFM1O95831 613 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 HPRP00739 348 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF888P0CJ79 500 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 ARAFP10398 606 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CSNK2A2P19784 350 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CERS1P27544 350 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 TLX1P31314 330 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CAPZBP47756 277 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 DSTNP60981 165 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 SKP1P63208 163 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 BTN3A2P78410 334 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 PRSS53Q2L4Q9 553 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 LRRC23Q53EV4 343 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 ENPP6Q6UWR7 440 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 LRRC69Q6ZNQ3 347 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 PATL1Q86TB9 770 aaKnown RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 MMP21Q8N119 569 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CARFQ8N187 725 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 GALNT4Q8N4A0 578 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 PNPT1Q8TCS8 783 aaKnown RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 CD180Q99467 661 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 NPLQ9BXD5 320 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-221ENST00000567935 RAB33BQ9H082 229 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 IL21RQ9HBE5 538 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 A4GALTQ9NPC4 353 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 IL1RAPQ9NPH3 570 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 BAG5Q9UL15 447 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 OAZ3Q9UMX2 235 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 SLC22A7Q9Y694 548 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 V9GYQ6 96 aa13.79□□□□□ -0.2
COMMD4-221ENST00000567935 A0A0G2JN53 185 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 C4orf51C9J302 202 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 H0YGG7 62 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 PPM1DO15297 605 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SUV39H1O43463 412 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SRPX2O60687 465 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 PIAS2O75928 621 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 PDE9AO76083 593 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF682O95780 498 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CST1P01037 141 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CKMT2P17540 419 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 ALOX12P18054 663 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CDH3P22223 829 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 MAOBP27338 520 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 MPIP34949 423 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 MAZP56270 477 aaKnown RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 RAB8AP61006 207 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CDK6Q00534 326 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 TNFRSF17Q02223 184 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 EPS8Q12929 822 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 BLMHQ13867 455 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SCARB2Q14108 478 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 C14orf28Q4W4Y0 310 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 PIWIL3Q7Z3Z3 882 aaKnown RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 RNF130Q86XS8 419 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 EPHX4Q8IUS5 362 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CBR4Q8N4T8 237 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 AMER3Q8N944 861 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 C19orf47Q8N9M1 422 aaKnown RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 LZICQ8WZA0 190 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SLC38A3Q99624 504 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CCDC3Q9BQI4 270 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SLAMF7Q9NQ25 335 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SIRT3Q9NTG7 399 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-221ENST00000567935 GPATCH2Q9NW75 528 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 EPHA6Q9UF33 1036 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SCOCQ9UIL1 159 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 CES1P1Q9UKY3 287 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 SNX8Q9Y5X2 465 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 ZNF780BQ9Y6R6 833 aa13.78□□□□□ -0.2
COMMD4-221ENST00000567935 A0A1B0GTW7 788 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 TMEM247A6NEH6 219 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 B8ZZF3 427 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ERVH48-1M5A8F1 160 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 GNGT2O14610 69 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ACOX3O15254 700 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 SEMG1P04279 462 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms