RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 SCN1BQ07699 218 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 DPY19L3Q6ZPD9 716 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 CHTF18Q8WVB6 975 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 C2orf49Q9BVC5 232 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 NLKQ9UBE8 527 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 ZNF282Q9UDV7 671 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 F5P12259 2224 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 WASHC1A8K0Z3 465 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 CENPBD1B2RD01 187 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 DVL2O14641 736 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRAME-214ENST00000543184 PTPN5P54829 565 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 YIF1BQ5BJH7 314 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 LYPLAL1Q5VWZ2 237 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 LIPJQ5W064 366 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 WASH2PQ6VEQ5 465 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 Q6ZVU0 165 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 PDZD3Q86UT5 571 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 OR2AP1Q8NGE2 309 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 PCNPQ8WW12 178 aaKnown RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 KLHL6Q8WZ60 621 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 UCN3Q969E3 161 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 PPCDCQ96CD2 204 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 TMEM80Q96HE8 168 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 C3orf14Q9HBI5 128 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SLC25A19Q9HC21 320 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 REV1Q9UBZ9 1251 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SSR3Q9UNL2 185 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 TRAPPC4Q9Y296 219 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 NUMA1Q14980 2115 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 AGAP14A8MT82 685 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 ZNF670-ZNF695F2Z2N8 137 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SH3BP5O60239 455 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 KLHL18O94889 574 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 IGSF6O95976 241 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 IMPA1P29218 277 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SOX18P35713 384 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 LIMS1P48059 325 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 PXNP49023 591 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 ARPC4P59998 168 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 ALDH6A1Q02252 535 aaKnown RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 TARDBPQ13148 414 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRAME-214ENST00000543184 GLYR1Q49A26 553 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 GET4Q7L5D6 327 aaPredicted RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 HSD11B1LQ7Z5J1 315 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 COMTD1Q86VU5 262 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 OR52N2Q8NGI0 321 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 GEMIN6Q8WXD5 167 aaKnown RBP13.49□□□□□ -0.25
PRAME-214ENST00000543184 FRMD6Q96NE9 622 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 NELL2Q99435 816 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 SLC22A4Q9H015 551 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 COQ3Q9NZJ6 369 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 STUB1Q9UNE7 303 aa13.49□□□□□ -0.25
PRAME-214ENST00000543184 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 LOC102723532A0A0G2JNH3 316 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 ANKDD1BA6NHY2 528 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 C12orf71A8MTZ7 269 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 MYL12BO14950 172 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 IFNW1P05000 195 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 YES1P07947 543 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 SPINT3P49223 89 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 EEF1A2Q05639 463 aaKnown RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 ANXA8L1Q5VT79 327 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 ZNF770Q6IQ21 691 aaPredicted RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 HORMAD2Q8N7B1 307 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 GPR32P1Q8NGA4 272 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 OR52P1PQ8NH57 321 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 C9orf43Q8TAL5 461 aaPredicted RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 ENKURQ8TC29 256 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 CREB3L4Q8TEY5 395 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 TM9SF4Q92544 642 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 SUV39H2Q9H5I1 410 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 RNF121Q9H920 327 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 MOSPD1Q9UJG1 213 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 NOTCH4Q99466 2003 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 PRMT3O60678 531 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 NME6O75414 186 aaPredicted RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 IL3P08700 152 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 XKP51811 444 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRAME-214ENST00000543184 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 TYW3Q6IPR3 259 aaKnown RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 METTL2BQ6P1Q9 378 aaKnown RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 TECPR1Q7Z6L1 1165 aa13.48□□□□□ -0.25
PRAME-214ENST00000543184 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.48□□□□□ -0.25
PRAME-214ENST00000543184 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms