RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ZNF630Q2M218 657 aaPredicted RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 TMEM52BQ4KMG9 183 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 ZMAT1Q5H9K5 638 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 RPS26P11Q5JNZ5 115 aaPredicted RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 NXNL2Q5VZ03 156 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 SLC44A2Q8IWA5 706 aaPredicted RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 REPS1Q96D71 796 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 ZNF514Q96K75 400 aaPredicted RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 BARHL1Q9BZE3 327 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 MOV10Q9HCE1 1003 aaKnown RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 HHATLQ9HCP6 504 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 CLEC2DQ9UHP7 191 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 STON1Q9Y6Q2 735 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 NINQ8N4C6 2090 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 TRBV4-1A0A0J9YWV2 114 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 A0A1W2PRB8 838 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 EPOPA6NHQ4 379 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 A6NL46 340 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 AP3D1O14617 1153 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 FFAR1O14842 300 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 IFNA14P01570 189 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 ACP5P13686 325 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 RHCEP18577 417 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
RNF4-222ENST00000541204 MAPK9P45984 424 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 CLCNKAP51800 687 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 LIM2P55344 173 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
RNF4-222ENST00000541204 TOR1AIP1Q5JTV8 583 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 ZNF765Q7L2R6 523 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 NRARPQ7Z6K4 114 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 FAM20CQ8IXL6 584 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 HDDC3Q8N4P3 179 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 NEDD4LQ96PU5 975 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 ASPNQ9BXN1 380 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 C5AR2Q9P296 337 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 GPR34Q9UPC5 381 aa11.88□□□□□ -0.51
RNF4-222ENST00000541204 A0A0G2JN53 185 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 H7BY64 318 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 VEGFDO43915 354 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 MPZL2O60487 215 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 IFNW1P05000 195 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 SERPIND1P05546 499 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 KRT8P05787 483 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 S100A1P23297 94 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 TGM4P49221 684 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 RPS26P62854 115 aaKnown RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 PCDH1Q08174 1060 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 PDE7AQ13946 482 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 C2orf27AQ580R0 203 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 KLHDC8AQ8IYD2 350 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 GPR151Q8TDV0 419 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 CHAC2Q8WUX2 184 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 RAD51AP1Q96B01 352 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 PRAP1Q96NZ9 151 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 OR2A14Q96R47 310 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 SLX1AQ9BQ83 275 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 XKR8Q9H6D3 395 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 DNAJC27Q9NZQ0 273 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 THAP10Q9P2Z0 257 aaPredicted RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 CRNNQ9UBG3 495 aaPredicted RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 MUTYHQ9UIF7 546 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ANGPT4Q9Y264 503 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 WBP11Q9Y2W2 641 aaKnown RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 DOCK9Q9BZ29 2069 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 WWP2O00308 870 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 SCG5P05408 212 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 IL3P08700 152 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ARAFP10398 606 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 HTR3AP46098 478 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 CST6Q15828 149 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 FAM71E1Q6IPT2 247 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 PARM1Q6UWI2 310 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 BCDIN3DQ7Z5W3 292 aaKnown RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 ADCK2Q7Z695 626 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 PDZD3Q86UT5 571 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 LRRTM4Q86VH4 590 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 FGF14Q92915 247 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 TRMT61AQ96FX7 289 aaKnown RBP11.87□□□□□ -0.51
RNF4-222ENST00000541204 F2RL3Q96RI0 385 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ABCG4Q9H172 646 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 TPK1Q9H3S4 243 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 DPEP2Q9H4A9 486 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 FZD3Q9NPG1 666 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 ENOPH1Q9UHY7 261 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 KCNK6Q9Y257 313 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 F5P12259 2224 aa11.87□□□□□ -0.51
RNF4-222ENST00000541204 C2orf16Q68DN1 1984 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms