RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 NBPF5PQ86XG9 351 aaPredicted RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 CACUL1Q86Y37 369 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 EFCAB13Q8IY85 973 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 GPC2Q8N158 579 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 DNAJC22Q8N4W6 341 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 MLKLQ8NB16 471 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 DDHD1Q8NEL9 900 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 OR5AU1Q8NGC0 362 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 OR5D13Q8NGL4 314 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 ZNF473Q8WTR7 871 aaKnown RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 RPL3LQ92901 407 aaKnown RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 PEX13Q92968 403 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 PCED1BQ96HM7 432 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 GSDMAQ96QA5 445 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 CLSTN2Q9H4D0 955 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 RPAP3Q9H6T3 665 aaPredicted RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 EXO5Q9H790 373 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 DBF4Q9UBU7 674 aaPredicted RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 PRDM4Q9UKN5 801 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 KLF2Q9Y5W3 355 aaPredicted RBP4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 PHLPP2Q6ZVD8 1323 aa4.39□□□□□ -1.71
TMEM87B-202ENST00000452029 ATP10DQ9P241 1426 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 ARID2Q68CP9 1835 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 IGLV5-37A0A075B6J1 123 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 A0A075B6Q4 140 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 METTL21EPA6NDL7 271 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SRRM3A6NNA2 597 aaPredicted RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 FOXE1O00358 373 aaPredicted RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 MATN3O15232 486 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 LRRTM2O43300 516 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SYNGR3O43761 229 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 LCMT2O60294 686 aaKnown RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SYF2O95926 243 aaKnown RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 AGTP01019 485 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 UMODP07911 640 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 POLR2MP0CAP2 368 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SLC2A3P11169 496 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 CDH1P12830 882 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 TSPAN8P19075 237 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 MSH3P20585 1137 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 CA6P23280 308 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 CAPGP40121 348 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 DNA2P51530 1060 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 FUT6P51993 359 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 DLG1Q12959 904 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 HADHQ16836 314 aaKnown RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SHC4Q6S5L8 630 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 PCSK4Q6UW60 755 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 DPY19L2P2Q6ZN68 376 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SLC24A5Q71RS6 500 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 PARGQ86W56 976 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SPEM1Q8N4L4 309 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 BBOF1Q8ND07 529 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 OR9K2Q8NGE7 335 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SLC2A14Q8TDB8 520 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 PIGCQ92535 297 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 AGAP3Q96P47 875 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SORCS2Q96PQ0 1159 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 OMDQ99983 421 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 MTG1Q9BT17 334 aaPredicted RBP4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 GSDMCQ9BYG8 508 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 TRIM9Q9C026 710 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 FANCEQ9HB96 536 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 LPAR2Q9HBW0 351 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SPATA7Q9P0W8 599 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 MAN1B1Q9UKM7 699 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 CGNL1Q0VF96 1302 aa4.38□□□□□ -1.71
TMEM87B-202ENST00000452029 SHISA7A6NL88 538 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 LRRC30A6NM36 301 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 H0YL77 283 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 H3BTX0 84 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 CCSO14618 274 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 SH2D1BO14796 132 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 KRT33AO76009 404 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 SLITRK3O94933 977 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 CALCAP01258 141 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 PABPC4LP0CB38 370 aaKnown RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 PNMTP11086 282 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 ZNF12P17014 697 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 TPSB2P20231 275 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 FNTAP49354 379 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 SGSHP51688 502 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 HMGA2P52926 109 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 ELLP55199 621 aaPredicted RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 RPS4XP62701 263 aaKnown RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 HERVK_113P63132 956 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 ERVK-8P63133 956 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 MYL7Q01449 175 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 COL10A1Q03692 680 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 CSTF1Q05048 431 aaKnown RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 NCBP1Q09161 790 aaKnown RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 TPSAB1Q15661 275 aa4.37□□□□□ -1.71
TMEM87B-202ENST00000452029 C3AR1Q16581 482 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms