RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
TMEM87B-202ENST00000452029 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
TMEM87B-202ENST00000452029 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
TMEM87B-202ENST00000452029 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
TMEM87B-202ENST00000452029 FOXD1Q16676 465 aa16.4■□□□□ 0.22
TMEM87B-202ENST00000452029 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
TMEM87B-202ENST00000452029 MSH5O43196 834 aa15.49■□□□□ 0.07
TMEM87B-202ENST00000452029 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
TMEM87B-202ENST00000452029 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
TMEM87B-202ENST00000452029 ADRA2BP18089 450 aa14.92□□□□□ -0.02
TMEM87B-202ENST00000452029 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
TMEM87B-202ENST00000452029 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
TMEM87B-202ENST00000452029 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
TMEM87B-202ENST00000452029 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
TMEM87B-202ENST00000452029 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
TMEM87B-202ENST00000452029 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
TMEM87B-202ENST00000452029 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
TMEM87B-202ENST00000452029 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
TMEM87B-202ENST00000452029 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
TMEM87B-202ENST00000452029 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
TMEM87B-202ENST00000452029 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
TMEM87B-202ENST00000452029 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
TMEM87B-202ENST00000452029 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
TMEM87B-202ENST00000452029 KCNA4P22459 653 aa12.83□□□□□ -0.36
TMEM87B-202ENST00000452029 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
TMEM87B-202ENST00000452029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM87B-202ENST00000452029 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
TMEM87B-202ENST00000452029 POTEHQ6S545 545 aa12.43□□□□□ -0.42
TMEM87B-202ENST00000452029 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
TMEM87B-202ENST00000452029 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
TMEM87B-202ENST00000452029 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
TMEM87B-202ENST00000452029 DSG3P32926 999 aa12.2□□□□□ -0.46
TMEM87B-202ENST00000452029 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
TMEM87B-202ENST00000452029 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
TMEM87B-202ENST00000452029 CAPN15O75808 1086 aa12.19□□□□□ -0.46
TMEM87B-202ENST00000452029 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
TMEM87B-202ENST00000452029 ABCB7O75027 752 aa11.9□□□□□ -0.5
TMEM87B-202ENST00000452029 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
TMEM87B-202ENST00000452029 ZBTB22O15209 634 aa11.87□□□□□ -0.51
TMEM87B-202ENST00000452029 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
TMEM87B-202ENST00000452029 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
TMEM87B-202ENST00000452029 APLP2Q06481 763 aa11.74□□□□□ -0.53
TMEM87B-202ENST00000452029 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
TMEM87B-202ENST00000452029 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
TMEM87B-202ENST00000452029 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
TMEM87B-202ENST00000452029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
TMEM87B-202ENST00000452029 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
TMEM87B-202ENST00000452029 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
TMEM87B-202ENST00000452029 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
TMEM87B-202ENST00000452029 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
TMEM87B-202ENST00000452029 POLA2Q14181 598 aa11.44□□□□□ -0.58
TMEM87B-202ENST00000452029 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
TMEM87B-202ENST00000452029 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
TMEM87B-202ENST00000452029 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
TMEM87B-202ENST00000452029 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
TMEM87B-202ENST00000452029 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
TMEM87B-202ENST00000452029 HAX1O00165 279 aa11.17□□□□□ -0.62
TMEM87B-202ENST00000452029 FKBP8Q14318 412 aa11.15□□□□□ -0.62
TMEM87B-202ENST00000452029 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
TMEM87B-202ENST00000452029 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
TMEM87B-202ENST00000452029 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
TMEM87B-202ENST00000452029 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
TMEM87B-202ENST00000452029 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM87B-202ENST00000452029 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
TMEM87B-202ENST00000452029 EVX2Q03828 476 aa11.01□□□□□ -0.65
TMEM87B-202ENST00000452029 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
TMEM87B-202ENST00000452029 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
TMEM87B-202ENST00000452029 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
TMEM87B-202ENST00000452029 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
TMEM87B-202ENST00000452029 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
TMEM87B-202ENST00000452029 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
TMEM87B-202ENST00000452029 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
TMEM87B-202ENST00000452029 LHX8Q68G74 356 aa10.71□□□□□ -0.69
TMEM87B-202ENST00000452029 GABBR2O75899 941 aa10.7□□□□□ -0.7
TMEM87B-202ENST00000452029 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
TMEM87B-202ENST00000452029 FBLN2P98095 1184 aa10.67□□□□□ -0.7
TMEM87B-202ENST00000452029 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
TMEM87B-202ENST00000452029 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
TMEM87B-202ENST00000452029 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
TMEM87B-202ENST00000452029 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
TMEM87B-202ENST00000452029 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
TMEM87B-202ENST00000452029 HAP1P54257 671 aaPredicted RBP10.53□□□□□ -0.72
TMEM87B-202ENST00000452029 BCANQ96GW7 911 aa10.53□□□□□ -0.72
TMEM87B-202ENST00000452029 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
TMEM87B-202ENST00000452029 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
TMEM87B-202ENST00000452029 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
TMEM87B-202ENST00000452029 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
TMEM87B-202ENST00000452029 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
TMEM87B-202ENST00000452029 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
TMEM87B-202ENST00000452029 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
TMEM87B-202ENST00000452029 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMEM87B-202ENST00000452029 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
TMEM87B-202ENST00000452029 PROM2Q8N271 834 aa10.37□□□□□ -0.75
TMEM87B-202ENST00000452029 FARP1Q9Y4F1 1045 aaPredicted RBP10.35□□□□□ -0.75
TMEM87B-202ENST00000452029 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
TMEM87B-202ENST00000452029 PKD2Q13563 968 aa10.33□□□□□ -0.76
TMEM87B-202ENST00000452029 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
TMEM87B-202ENST00000452029 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
TMEM87B-202ENST00000452029 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
TMEM87B-202ENST00000452029 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms