RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TAF13Q15543 124 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 XKRXQ6PP77 449 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 LHFPL3Q86UP9 236 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 OR4E2Q8NGC2 313 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 OR4K14Q8NGD5 310 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 POF1BQ8WVV4 589 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 XKR8Q9H6D3 395 aa15.86■□□□□ 0.13
TCOF1-206ENST00000445265 INMT-MINDY4F8WBC2 141 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 J3QLW9 94 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF19P17023 458 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 DDCP20711 480 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 CTSCP53634 463 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 PPP2R2BQ00005 443 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 LRIF1Q5T3J3 769 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 OR4C11Q6IEV9 310 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 Q8N402 240 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 NARS2Q96I59 477 aaKnown RBP15.85■□□□□ 0.13
TCOF1-206ENST00000445265 COMMD4Q9H0A8 199 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 FBXL12Q9NXK8 326 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 MSRAQ9UJ68 235 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 SHROOM3Q8TF72 1996 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 TAS2R38P59533 333 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HSF2Q03933 536 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 GRHL3Q8TE85 626 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 GGHQ92820 318 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ENAMQ9NRM1 1142 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 COQ9O75208 318 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 PEX11BO96011 259 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 SYT6Q5T7P8 510 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ALG1LQ6GMV1 187 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 LCTLQ6UWM7 567 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-206ENST00000445265 RNF175Q8N4F7 328 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 GDPD1Q8N9F7 314 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF480Q8WV37 535 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HRASLS5Q96KN8 279 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 GINS4Q9BRT9 223 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 RSPH9Q9H1X1 276 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-206ENST00000445265 KCNK12Q9HB15 430 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 SLC35C2Q9NQQ7 365 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HCN2Q9UL51 889 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HS3ST2Q9Y278 367 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 N6AMT1Q9Y5N5 214 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 A0A0G2JPF8 293 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HNRNPCL3B7ZW38 293 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ITGA10O75578 1167 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 C1SP09871 688 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 HNRNPCL4P0DMR1 293 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 IL1RNP18510 177 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ISL1P61371 349 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 MC1RQ01726 317 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 UGT8Q16880 541 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 DNAJC22Q8N4W6 341 aa15.85■□□□□ 0.13
TCOF1-206ENST00000445265 TSEN15Q8WW01 171 aaKnown RBP15.85■□□□□ 0.13
TCOF1-206ENST00000445265 ANXA2P2A6NMY6 339 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 PROM1O43490 865 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SEMA3DO95025 777 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 ECDO95905 644 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 ANXA2P07355 339 aaKnown RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 TACSTD2P09758 323 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 NUDT7P0C024 238 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 PRLHRP49683 370 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 MLLT10P55197 1068 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 HBA1P69905 142 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 PON3Q15166 354 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 BHLHA9Q7RTU4 235 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SETD6Q8TBK2 473 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 ERMAPQ96PL5 475 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 EXTL2Q9UBQ6 330 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 ZDHHC11BP0C7U3 371 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 C15orf40Q8WUR7 153 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 RPL3LQ92901 407 aaKnown RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 DPEP2Q9H4A9 486 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 MVB12BQ9H7P6 319 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 FEZF1A0PJY2 475 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 A8MV72 311 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 PIM1P11309 404 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 AKT2P31751 481 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 LIPIQ6XZB0 460 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 RTN4RL1Q86UN2 441 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-206ENST00000445265 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.84■□□□□ 0.139e-8■□□□□ 8.4
TCOF1-206ENST00000445265 SUN5Q8TC36 379 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SYN1P17600 705 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SLC6A6P31641 620 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 GCGRP47871 477 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 TRAM1Q15629 374 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SLC35F1Q5T1Q4 408 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 RPL13AP3Q6NVV1 102 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 CEP68Q76N32 757 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SPNS2Q8IVW8 549 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 TNFAIP8L1Q8WVP5 186 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 GATAD2BQ8WXI9 593 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 SPACA7Q96KW9 195 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 C11orf49Q9H6J7 331 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 BRD7Q9NPI1 651 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 CDH10Q9Y6N8 788 aa15.84■□□□□ 0.13
TCOF1-206ENST00000445265 A0A1W2PQ72 361 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 PRKYO43930 277 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms