RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 SERTAD2Q14140 314 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 TBCCQ15814 346 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 AP5B1Q2VPB7 878 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 PIGGQ5H8A4 983 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 NDUFAF5Q5TEU4 345 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 RTL6Q6ICC9 239 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 DGAT2L6Q6ZPD8 337 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ACAD11Q709F0 780 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 TMEM200AQ86VY9 491 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 FAM109AQ8N4B1 249 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 GOLM1Q8NBJ4 401 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 OR5L2Q8NGL0 311 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 OR8K3Q8NH51 312 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 NRGNQ92686 78 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 CDKL2Q92772 493 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 SENP5Q96HI0 755 aaPredicted RBP9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 SGCZQ96LD1 299 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 DGAT2Q96PD7 388 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 CPNE1Q99829 537 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ZNF559Q9BR84 538 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 TTYH2Q9BSA4 534 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 TBCDQ9BTW9 1192 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 CNPPD1Q9BV87 410 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 CD244Q9BZW8 370 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 OR51B5Q9H339 312 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 LDAHQ9H6V9 325 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 SACM1LQ9NTJ5 587 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ALKBH4Q9NXW9 302 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 COPS7AQ9UBW8 275 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ACAD8Q9UKU7 415 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ATG4BQ9Y4P1 393 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 FAM215AQ9Y5M1 114 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 SPACA6W5XKT8 324 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ANKHD1Q8IWZ3 2542 aaKnown RBP9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 ACANP16112 2415 aa9.05□□□□□ -0.96
NIFKP1-201ENST00000398317 NIPBLQ6KC79 2804 aaeCLIP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 A0A0G2JNJ9 132 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 A0A1B0GVC2 190 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 TCRBV9S1A1TA0A576 114 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SYNDIG1LA6NDD5 238 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 FAM159BA6NKW6 160 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 WASHC1A8K0Z3 465 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 FOXO6A8MYZ6 492 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 UBXN8O00124 270 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 BCKDKO14874 412 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SUPT3HO75486 399 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 LRATO95237 230 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 HOXD4P09016 255 aaPredicted RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 GP5P40197 560 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 CASP2P42575 452 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SSR2P43308 183 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 STT3AP46977 705 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 MAN2A2P49641 1150 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 GPX6P59796 221 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 RAB10P61026 200 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 MYBPHQ13203 477 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SLAMF1Q13291 335 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 DDX39BQ13838 428 aaKnown RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SNTB1Q13884 538 aaKnown RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SLC10A1Q14973 349 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 ZKSCAN8Q15776 578 aaPredicted RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 TMEM35AQ53FP2 167 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 C18orf63Q68DL7 685 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 MED27Q6P2C8 311 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 OPN5Q6U736 354 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 B3GNT6Q6ZMB0 384 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SPNS3Q6ZMD2 512 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 C3orf62Q6ZUJ4 267 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 RAPH1Q70E73 1250 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 LRRC70Q7Z2Q7 622 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 CMC1Q7Z7K0 106 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 ISCA2Q86U28 154 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 LIX1LQ8IVB5 337 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 C9orf40Q8IXQ3 194 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 BBOF1Q8ND07 529 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 OR7G3Q8NG95 312 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 UBXN10Q96LJ8 280 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 ROGDIQ9GZN7 287 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 EXO5Q9H790 373 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 RPF2Q9H7B2 306 aaKnown RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 NUDT4Q9NZJ9 180 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 Q9UFV3 132 aa9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
NIFKP1-201ENST00000398317 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 K7EPI3 171 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 AQP7O14520 342 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 RAD51CO43502 376 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 KLK8O60259 260 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 SCELO95171 688 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 NADKO95544 446 aaPredicted RBP9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 C1QAP02745 245 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 SLC35E2BP0CK96 405 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 COX7A2P14406 83 aa9.03□□□□□ -0.96
NIFKP1-201ENST00000398317 ENDOUP21128 410 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms