RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SLC36A4Q6YBV0 504 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 PSORS1C1Q9UIG5 152 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 KCNK6Q9Y257 313 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 INSL5Q9Y5Q6 135 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 CHMP24386 653 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 AOAHP28039 575 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MPIP34949 423 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MNDAP41218 407 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 HOXC5Q00444 222 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 ST3GAL3Q11203 375 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 CTF1Q16619 201 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 RIMKLAQ8IXN7 391 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 OR5D16Q8NGK9 328 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 C16orf78Q8WTQ4 265 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 EPYCQ99645 322 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MCHR1Q99705 422 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 SLC6A13Q9NSD5 602 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 FAAHO00519 579 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 HMGN1P05114 100 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF10P21506 573 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 MASP1P48740 699 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 PSRC1Q6PGN9 363 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 DHRS4L2Q6PKH6 230 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 B3GLCTQ6Y288 498 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 AKAP1Q92667 903 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 NUS1Q96E22 293 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 ERMAPQ96PL5 475 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-201ENST00000361866 BTBD1Q9H0C5 482 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 SYNDIG1Q9H7V2 258 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 DIABLOQ9NR28 239 aa13.26□□□□□ -0.29
COL6A1-201ENST00000361866 CACNG3O60359 315 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 REM1O75628 298 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 PYCR1P32322 319 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 COX20Q5RI15 118 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 VRK3Q8IV63 474 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 DYNC2LI1Q8TCX1 351 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 RFT1Q96AA3 541 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CAMK1GQ96NX5 476 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 FYTTD1Q96QD9 318 aaKnown RBP13.25□□□□□ -0.29
COL6A1-201ENST00000361866 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 PPT2Q9UMR5 302 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 A0A1W2PRG6 482 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 OR2A25A4D2G3 310 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF821O75541 412 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-201ENST00000361866 RASGRP1O95267 797 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 ADAP00813 363 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 PDHA2P29803 388 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CTBSQ01459 385 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 DSG2Q14126 1118 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 TATDN3Q17R31 274 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 KDM4DQ6B0I6 523 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CHCHD4Q8N4Q1 142 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 DUSP21Q9H596 190 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 RABL2AQ9UBK7 228 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-201ENST00000361866 BTNL2Q9UIR0 455 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 ERVW-1Q9UQF0 538 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 SLC45A1Q9Y2W3 748 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 FXYD6-FXYD2A0A087WZ82 144 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 LEFTY2O00292 366 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 LYRM1O43325 122 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 GASTP01350 101 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 IFNA7P01567 189 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CTNNB1P35222 781 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 GCGRP47871 477 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 CTSCP53634 463 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 PPP3R1P63098 170 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 LRRC32Q14392 662 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 EIF4HQ15056 248 aaKnown RBP13.25□□□□□ -0.29
COL6A1-201ENST00000361866 TPGS2Q68CL5 300 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 GDPD3Q7L5L3 318 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 RANBP3LQ86VV4 465 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-201ENST00000361866 TESCQ96BS2 214 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 NEDD4LQ96PU5 975 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 FXYD6Q9H0Q3 95 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 TRIM36Q9NQ86 728 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 IL36AQ9UHA7 158 aa13.25□□□□□ -0.29
COL6A1-201ENST00000361866 SH3D21A4FU49 640 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 CENPBD1B2RD01 187 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 CLEC2LP0C7M8 214 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 IDSP22304 550 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 APEX1P27695 318 aaKnown RBP13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SUOXP51687 545 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 TSPAN5P62079 268 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SLC30A8Q8IWU4 369 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
COL6A1-201ENST00000361866 SMPDL3AQ92484 453 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms