RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ICOSLGO75144 302 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CCNDBP1O95273 360 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TCRBP04435 133 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 BPIP17213 487 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MMP12P39900 470 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TLE2Q04725 743 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CHAF1BQ13112 559 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TSNQ15631 228 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 GCNT6Q5T4J0 391 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ELP2Q6IA86 826 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 FAM109BQ6ICB4 259 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 LCLAT1Q6UWP7 414 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CALHM3Q86XJ0 350 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 OXR1Q8N573 874 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 OR52B6Q8NGF0 335 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 RXFP4Q8TDU9 374 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CENPIQ92674 756 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TBL1YQ9BQ87 522 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CHMP1AQ9HD42 196 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 PHF11Q9UIL8 331 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MRPL42Q9Y6G3 142 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 COL11A1P12107 1806 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 DISC1C4P0D8 188 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 H0YCG3 227 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CASKO14936 926 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ADAMDEC1O15204 470 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 EEF1E1O43324 174 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ENTPD6O75354 484 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 HEXBP07686 556 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ANKRD34CP0C6C1 535 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 AKR1C2P52895 323 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 RPS25P62851 125 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 AKR1C1Q04828 323 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 AVPI1Q5T686 147 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 RAET1GQ6H3X3 334 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 IL27RAQ6UWB1 636 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 LBX2Q6XYB7 198 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 BCDIN3DQ7Z5W3 292 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SERPINA12Q8IW75 414 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TMEM192Q8IY95 271 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 EIF4E3Q8N5X7 224 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TMEM163Q8TC26 289 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SETD7Q8WTS6 366 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TSNAXQ99598 290 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 INPP5KQ9BT40 448 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 THAP7Q9BT49 309 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 HEBP1Q9NRV9 189 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TREX1Q9NSU2 369 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 NKIRAS2Q9NYR9 191 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CENPFP49454 3210 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MIA3Q5JRA6 1907 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MEX3AA1L020 520 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 DCLK1O15075 740 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CASC3O15234 703 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 COX5BP10606 129 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 IL1RNP18510 177 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MST1P26927 711 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 CTNNB1P35222 781 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 TSPAN7P41732 249 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ACTR1BP42025 376 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 RPL38P63173 70 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 PAFAH1B3Q15102 231 aaKnown RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SLC14A2Q15849 920 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SSX2Q16385 188 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ZCCHC12Q6PEW1 402 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 PTCHD4Q6ZW05 846 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 C1orf127Q8N9H9 656 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 REPS2Q8NFH8 660 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 OR52E6Q96RD3 313 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ATOH8Q96SQ7 321 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 PTPN18Q99952 460 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 JAM3Q9BX67 310 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 ZYG11BQ9C0D3 744 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 SPATC1LQ9H0A9 340 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 DNAJC27Q9NZQ0 273 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 MARCH4Q9P2E8 410 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-203ENST00000349748 RBPJLQ9UBG7 517 aa10.14□□□□□ -0.79
CAPN3-203ENST00000349748 A0A0U1RQF3 1178 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 PLSCR5A0PG75 271 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 METTL21EPA6NDL7 271 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 WISP3O95389 354 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 F12P00748 615 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 TFP02787 698 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 IL6P05231 212 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 NFICP08651 508 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 TNFRSF1BP20333 461 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 DRD5P21918 477 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 ITGA1P56199 1179 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 FKBP1BP68106 108 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 RNF4P78317 190 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 STX4Q12846 297 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 GK2Q14410 553 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 CRTC2Q53ET0 693 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-203ENST00000349748 SPIN4Q56A73 249 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 OR7E24Q6IFN5 339 aa10.13□□□□□ -0.79
CAPN3-203ENST00000349748 CRTC1Q6UUV9 634 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms