RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OR1E3Q8WZA6 343 aa15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 SLC39A3Q9BRY0 314 aa15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 ZDHHC5Q9C0B5 715 aa15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 SEC61A2Q9H9S3 476 aa15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 PRSS21Q9Y6M0 314 aa15.62■□□□□ 0.09
SMARCA4-201ENST00000344626 TAF1LQ8IZX4 1826 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 SEC14L5O43304 696 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 MNDAP41218 407 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 OR1D5P58170 312 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 PPP1R3AQ16821 1122 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ADIPOR2Q86V24 386 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 OR7G3Q8NG95 312 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ASB6Q9NWX5 421 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ATXN7L1Q9ULK2 861 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 A0A1W2PPC4 97 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 FARS2O95363 451 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 GABRG2P18507 467 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 HSD11B1P28845 292 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 CTBP2P56545 445 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 GRB7Q14451 532 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 GPR153Q6NV75 609 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 NLGN4YQ8NFZ3 816 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ALOXE3Q9BYJ1 711 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 MBNL1Q9NR56 388 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 THSD1Q9NS62 852 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 NFKBIL1Q9UBC1 381 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 NSG1A0A0A6YYJ2 146 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 TCRBV5S1A1TA0A578 114 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ERVPABLB-1P60509 514 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 HSF2Q03933 536 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 DAG1Q14118 895 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 LNX2Q8N448 690 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ALPK1Q96QP1 1244 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 VN1R3Q9BXE9 311 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 IL37Q9NZH6 218 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 SARDHQ9UL12 918 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 DLL1O00548 723 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 PPM1BO75688 479 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 FPR1P21462 350 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 GPR143P51810 404 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 SMAD2Q15796 467 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 C18orf21Q32NC0 220 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 C6orf132Q5T0Z8 1188 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 AHSA2Q719I0 299 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ASB11Q8WXH4 323 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 METTL2AQ96IZ6 378 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 GORASP1Q9BQQ3 440 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 ZNF304Q9HCX3 659 aa15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 MYO5AQ9Y4I1 1855 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-201ENST00000344626 NPIPA2E9PIF3 369 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 NPIPA3F8WFD2 350 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 IFI30P13284 250 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 IER5LQ5T953 404 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 ZNF317Q96PQ6 595 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 DMRT3Q9NQL9 472 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 MROH6A6NGR9 719 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 ENO4A6NNW6 628 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 BLOC1S5-TXNDC5H3BN57 136 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 SOX1O00570 391 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 HTRA2O43464 458 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 GBX2P52951 348 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 NKX3-2P78367 333 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 SRSF5Q13243 272 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 PMS2P3Q13401 168 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 RBM44Q6ZP01 1051 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 GHDCQ8N2G8 530 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 UXS1Q8NBZ7 420 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 RCBTB1Q8NDN9 531 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 GNPDA2Q8TDQ7 276 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 COQ7Q99807 217 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 NKIRAS2Q9NYR9 191 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 RNF215Q9Y6U7 377 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 FAM92AA1XBS5 289 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 C5orf67F2Z3F1 127 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 SGK494L7N484 410 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 HOXC8P31273 242 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 C14orf28Q4W4Y0 310 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 CLEC12AQ5QGZ9 265 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 CDHR3Q6ZTQ4 885 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 LARP4Q71RC2 724 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 RAB11FIP2Q7L804 512 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 PACS2Q86VP3 889 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 ZNF433Q8N7K0 673 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 PDPRQ8NCN5 879 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 DEFB124Q8NES8 71 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 FAR1Q8WVX9 515 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 BCL2L14Q9BZR8 327 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 COL4A1P02462 1669 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 RNF13O43567 381 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 SEMA3DO95025 777 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 DBIP07108 87 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 CNR2P34972 360 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 PPP2CBP62714 309 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 PPP2CAP67775 309 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 MC1RQ01726 317 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 UGT3A2Q3SY77 523 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 KIAA1958Q8N8K9 716 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 NEIL2Q969S2 332 aa15.6■□□□□ 0.09
SMARCA4-201ENST00000344626 HS6ST2Q96MM7 605 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms